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Report for CCDS10352.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10352.2 Public Homo sapiens 15 TICRR 24 110 108 CCDS HistoryNCBI Gene:90381Re-query CCDS DB by CCDS ID:10352.2Re-query CCDS DB by GeneID:90381See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 10352.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268138.12 ENSP00000268138.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268138.12Link to Ensembl Protein Viewer:ENSP00000268138.7Re-query CCDS DB by Nucleotide ID:ENST00000268138Re-query CCDS DB by Protein ID:ENSP00000268138
Original member Current member NCBI NM_152259.4 NP_689472.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152259.4Link to Protein Sequence:NP_689472.3Re-query CCDS DB by Nucleotide ID:NM_152259Re-query CCDS DB by Protein ID:NP_689472Link to BLAST:NP_689472.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689472.3 1910 Q7Z2Z1-1 1910 100% 0 0

Chromosomal Locations for CCDS 10352.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89575587 89576240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89582686 89582965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89584286 89584527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89585708 89585942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89592047 89592176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89594415 89594554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89595393 89595611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89599324 89599475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89600585 89600685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89601298 89601391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89601489 89601568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89601737 89601976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89602796 89602892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89606768 89606825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89608803 89608949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89616405 89616495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89618152 89618210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89619708 89619842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89621393 89621550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89623623 89625786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89625936 89626061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89626956 89627086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5733 nt):
ATGGCATGCTGTCACAAAGTAATGCTGCTGCTGGACACCGCGGGCGGCGCCGCCCGCCACAGCCGGGTCC
GGCGGGCCGCCCTGCGCCTCCTCACCTATCTGAGTTGCCGATTCGGCCTGGCCAGGGTCCACTGGGCCTT
CAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCGGCCGTCCCGCGTGTCTGACTTCCGCGAGCTGGGGTCC
CGCTCGTGGGAGGACTTTGAGGAGGAGCTGGAGGCCAGGCTCGAGGATCGCGCCCACCTGCCCGGCCCGG
CGCCCAGGGCCACCCACACGCACGGCGCCCTGATGGAGACGCTGCTAGACTACCAGTGGGACCGGCCCGA
GATCACGTCGCCCACGAAGCCGATCCTGCGGAGCAGCGGGAGGAGACTGCTGGACGTGGAGAGCGAGGCC
AAGGAGGCCGAGGCCGCGCTCGGGGGCTTGGTGAACGCCGTCTTCCTCCTGGCCCCCTGTCCGCACTCGC
AGAGGGAGCTGCTGCAGTTCGTGTCTGGGTGCGAGGCCCAGGCCCAGCGCCTGCCGCCCACCCCTAAGCA
GGTGATGGAGAAGTTGTTGCCCAAGAGAGTCCGGGAAGTCATGGTCGCCCGAAAAATCACCTTCTACTGG
GTGGATACCACCGAATGGTCTAAGTTGTGGGAATCCCCAGACCACCTTGGATACTGGACTGTTTGTGAAC
TGCTCCACCACGGAGGTGGCACTGTCTTGCCATCTGAATCTTTCAGCTGGGATTTTGCTCAAGCTGGGGA
AATGCTGCTCAGGAGTGGAATAAAGCTGTCAAGTGAACCTCATCTTTCTCCGTGGATTTCAATGCTGCCA
ACTGATGCCACTTTAAACCGTTTGCTCTACAATTCTCCTGAGTATGAGGCCTCGTTTCCACGAATGGAAG
GAATGTTATTTCTCCCTGTTGAAGCAGGCAAAGAGATTCAAGAAACATGGACAGTCACCCTAGAGCCCTT
GGCCATGCATCAGAGACATTTTCAGAAACCAGTCAGAATTTTTCTAAAAGGCTCAGTGGCCCAGTGGTCT
CTCCCAACGAGCAGCACTTTGGGCACTGACAGCTGGATGCTAGGAAGTCCAGAGGAGAGCACAGCAACTC
AAAGGCTGTTATTTCAGCAGTTGGTAAGCAGGCTGACTGCTGAAGAGTTACACCTGGTTGCTGATGTGGA
CCCTGGTGAAGGCCGGCCCCCCATCACTGGAGTTATTTCCCCACTCTCTGCCAGTGCTATGATCCTCACT
GTGTGCCGCACCAAGGAGGCTGAATTTCAACGACATGTTCTCCAAACAGCTGTGGCTGACAGCCCCCGGG
ACACAGCTTCCCTTTTCTCAGATGTTGTGGATAGTATATTGAATCAGACTCATGATTCGCTTGCAGATAC
TGCTTCTGCTGCTTCTCCTGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCACACCACTCCCTGGAGTCCA
GCTGTTGTGGAAAAGTGGTTTCCTTTCTGTAACATCAGTGGTGCCAGTTCCGATTTGATGGAGTCATTTG
GGTTACTACAGGCTGCCTCAGCTAATAAGGAAGAGTCTTCCAAAACTGAAGGCGAATTAATACATTGCCT
TGCCGAGCTCTACCAGAGAAAATCTCGTGAAGAATCCACTATAGCTCATCAAGAAGACAGCAAAAAGAAA
CGAGGGGTCCCTCGTACTCCAGTGAGACAGAAGATGAATACCATGTGCCGTTCCTTAAAGATGTTGAATG
TCGCAAGGCTGAATGTGAAGGCCCAGAAGTTACATCCAGATGGCAGTCCGGATGTGGCTGGGGAGAAAGG
AATCCAAAAGATACCTAGTGGGAGAACAGTGGATAAATTGGAAGACAGAGGAAGAACACTAAGAAGTTCT
AAACCTAAAGATTTTAAAACTGAGGAAGAGCTGCTATCATATATACGTGAAAATTACCAAAAGACTGTGG
CCACAGGAGAAATCATGTTGTATGCATGTGCTCGAAACATGATCTCAACCGTTAAAATGTTCCTAAAATC
AAAAGGCACCAAGGAATTAGAAGTGAACTGCCTGAATCAAGTAAAAAGTAGTCTCTTAAAAACTAGTAAA
AGTCTTCGACAGAATCTAGGAAAAAAACTGGATAAGGAAGACAAAGTTAGAGAGTGCCAGCTTCAGGTAT
TTCTTCGTTTGGAGATGTGTCTGCAATGCCCTTCAATAAATGAAAGTACAGATGATATGGAACAAGTAGT
GGAGGAGGTGACAGATTTGCTGCGCATGGTGTGTTTAACTGAGGATTCAGCGTACCTAGCAGAGTTTCTG
GAGGAAATTTTGAGATTGTATATTGACTCTATCCCAAAGACACTTGGAAATCTTTACAACAGCCTAGGGT
TTGTGATTCCTCAGAAGCTGGCTGGTGTCCTTCCTACAGATTTTTTCAGTGATGACTCCATGACACAAGA
GAACAAATCACCACTTCTTTCTGTGCCTTTTTTGTCAAGTGCTCGTAGATCAGTGTCAGGCAGCCCTGAA
TCTGATGAACTGCAGGAACTTCGTACCAGATCAGCCAAGAAGAGAAGGAAAAATGCATTAATAAGACATA
AAAGCATTGCTGAGGTTTCACAGAATCTTCGACAAATTGAAATTCCTAAAGTGTCAAAGAGAGCTACGAA
AAAAGAGAACTCTCACCCTGCTCCTCAGCAGCCTTCCCAGCCAGTGAAAGATACAGTGCAAGAAGTGACC
AAAGTTCGAAGAAATCTTTTCAACCAGGAATTGCTTTCCCCTTCAAAGAGATCACTAAAGCGGGGGTTGC
CTAGAAGCCATTCTGTGTCAGCTGTGGATGGTCTAGAGGATAAACTTGACAACTTCAAGAAGAACAAAGG
TTATCACAAACTGCTGACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCTGCTG
CACAGACAAATCAAGGGCAGGTCCTCTGATCCTGGTCCTGATATTGGTGTTGTTGAAGAGTCCCCTGAAA
AAGGAGATGAAATAAGTCTGAGACGAAGTCCTCGAATCAAGCAGTTGTCATTTAGCAGGACACATTCTGC
CTCCTTCTATTCTGTGTCTCAGCCGAAGTCTCGAAGTGTGCAAAGAGTCCACTCTTTCCAGCAAGATAAG
TCAGACCAAAGAGAAAATTCTCCAGTCCAAAGTATTCGGTCTCCCAAGAGTCTTCTTTTTGGGGCAATGT
CTGAGATGATCAGCCCCTCAGAAAAGGGTTCAGCTCGAATGAAAAAGCGTTCAAGAAACACTTTGGATTC
GGAGGTACCTGCAGCTTACCAGACTCCCAAGAAGAGTCACCAGAAATCTCTGAGCTTTTCTAAAACTACA
CCAAGAAGGATCTCTCATACACCACAAACTCCGTTGTATACTCCAGAAAGGCTGCAGAAGTCCCCTGCAA
AAATGACCCCTACAAAGCAGGCAGCTTTTAAGGAGTCCTTAAAAGACTCCTCCTCACCCGGCCATGACTC
ACCATTGGATTCAAAAATCACTCCTCAAAAACGACATACCCAGGCAGGAGAAGGTACCTCTCTTGAAACG
AAGACACCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCTGGGTTTTTGCCAAACTGTACTTGGCCAC
ATTCAGTGAATTCCAGTCCAGAAAGCCCCTCCTGTCCAGCCCCTCCAACTTCATCGACTGCCCAGCCCAG
GAGAGAGTGTCTCACTCCCATCAGAGACCCTCTCAGAACACCTCCGAGAGCAGCAGCCTTCATGGGCACG
CCTCAGAATCAAACACACCAACAGCCCCATGTCCTCAGAGCTGCTCGGGCAGAGGAACCAGCCCAGAAAC
TAAAGGATAAAGCTATCAAAACTCCAAAAAGACCAGGGAATTCAACTGTGACTTCTTCCCCACCTGTTAC
GCCAAAGAAACTGTTTACCTCTCCTTTATGTGATGTCTCCAAGAAGAGTCCATTTAGGAAATCTAAAATA
GAGTGTCCTTCCCCAGGAGAACTGGATCAGAAAGAGCCCCAGATGTCACCCAGCGTAGCTGCATCTCTCT
CCTGCCCTGTTCCCTCAACTCCCCCTGAACTCTCACAGAGAGCTACATTGGACACCGTCCCTCCTCCACC
CCCTTCTAAAGTTGGGAAACGGTGTAGAAAGACCTCTGATCCCAGAAGGAGCATCGTGGAGTGTCAGCCT
GATGCCTCCGCTACTCCTGGGGTTGGCACAGCTGACAGCCCAGCTGCCCCCACAGACTCTAGAGATGACC
AGAAGGGACTGAGCCTCTCTCCTCAGTCTCCTCCTGAAAGACGGGGCTACCCAGGCCCTGGTCTCAGGAG
TGATTGGCATGCATCCTCTCCTCTGCTCATTACAAGTGACACAGAGCATGTCACTCTCCTCAGTGAAGCC
GAACACCATGGCATTGGTGACTTGAAAAGTAACGTCTTATCAGTGGAAGAGGGTGAGGGGCTAAGGACAG
CAGATGCTGAGAAGTCTTCTCTGTCTCACCCTGGGATTCCCCCATCTCCTCCTTCCTGTGGGCCTGGCTC
TCCTCTGATGCCTTCCCGTGACGTGCACTGTACCACAGATGGGAGACAGTGCCAGGCTTCGGCACAACTA
GACAACCTGCCAGCATCAGCTTGGCATTCCACAGACTCTGCCAGCCCACAGACCTATGAGGTTGAGCTGG
AGATGCAAGCTTCTGGCCTTCCCAAACTTCGAATTAAGAAGATAGACCCCAGCTCTTCATTAGAGGCTGA
GCCCCTCAGCAAGGAGGAGAGCTCTCTGGGAGAAGAGAGCTTCCTCCCTGCTCTCAGCATGCCCAGGGCC
AGCAGGTCCTTAAGCAAACCTGAACCCACCTATGTGTCACCCCCCTGCCCCCGCCTCTCCCACAGCACAC
CTGGCAAGAGCAGGGGGCAAACCTACATCTGCCAGGCCTGTACCCCCACCCACGGCCCTTCTAGTACCCC
CTCTCCATTTCAAACAGATGGGGTTCCTTGGACACCATCCCCCAAGCACAGTGGGAAGACAACTCCAGAC
ATAATTAAAGACTGGCCCAGGAGGAAGAGGGCGGTGGGCTGTGGCGCCGGCTCCTCTTCCGGGAGGGGCG
AGGTCGGTGCAGACCTTCCTGGGAGCCTGTCACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTGAACT
CAGCATCCACAGGACGCCCATCTTGGAGGATTTTGAGCTCGAGGGAGTGTGCCAGCTCCCAGACCAGTCG
CCTCCCAGGAACAGCATGCCTAAGGCCGAGGAAGCCTCTTCCTGGGGACAGTTTGGGTTGAGTTCCAGGA
AGAGAGTCCTGTTGGCCAAGGAAGAAGCTGACCGTGGAGCCAAAAGGATCTGTGACCTGAGAGAAGATTC
AGAAGTTAGTAAGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGGCAGCTACCCTCCACGGGAGACGAA
GAGGTGTTTGTTTCCGGCTCCACCCCACCTCCCAGCTGTGCCGTGCGGAGCTGCCTCTCTGCCAGTGCCC
TCCAGGCTCTGACCCAGTCTCCGCTGCTGTTCCAGGGGAAAACACCTTCCTCTCAGAGCAAAGACCCCAG
AGATGAGGATGTGGATGTTCTTCCCTCCACTGTAGAAGACTCTCCTTTCAGTCGCGCTTTCTCCAGGAGG
CGCCCCATCAGCAGAACTTATACACGGAAGAAGCTCATGGGAACCTGGCTGGAGGACTTATAG

Translation (1910 aa):
MACCHKVMLLLDTAGGAARHSRVRRAALRLLTYLSCRFGLARVHWAFKFFDSQGARSRPSRVSDFRELGS
RSWEDFEEELEARLEDRAHLPGPAPRATHTHGALMETLLDYQWDRPEITSPTKPILRSSGRRLLDVESEA
KEAEAALGGLVNAVFLLAPCPHSQRELLQFVSGCEAQAQRLPPTPKQVMEKLLPKRVREVMVARKITFYW
VDTTEWSKLWESPDHLGYWTVCELLHHGGGTVLPSESFSWDFAQAGEMLLRSGIKLSSEPHLSPWISMLP
TDATLNRLLYNSPEYEASFPRMEGMLFLPVEAGKEIQETWTVTLEPLAMHQRHFQKPVRIFLKGSVAQWS
LPTSSTLGTDSWMLGSPEESTATQRLLFQQLVSRLTAEELHLVADVDPGEGRPPITGVISPLSASAMILT
VCRTKEAEFQRHVLQTAVADSPRDTASLFSDVVDSILNQTHDSLADTASAASPVPEWAQQELGHTTPWSP
AVVEKWFPFCNISGASSDLMESFGLLQAASANKEESSKTEGELIHCLAELYQRKSREESTIAHQEDSKKK
RGVPRTPVRQKMNTMCRSLKMLNVARLNVKAQKLHPDGSPDVAGEKGIQKIPSGRTVDKLEDRGRTLRSS
KPKDFKTEEELLSYIRENYQKTVATGEIMLYACARNMISTVKMFLKSKGTKELEVNCLNQVKSSLLKTSK
SLRQNLGKKLDKEDKVRECQLQVFLRLEMCLQCPSINESTDDMEQVVEEVTDLLRMVCLTEDSAYLAEFL
EEILRLYIDSIPKTLGNLYNSLGFVIPQKLAGVLPTDFFSDDSMTQENKSPLLSVPFLSSARRSVSGSPE
SDELQELRTRSAKKRRKNALIRHKSIAEVSQNLRQIEIPKVSKRATKKENSHPAPQQPSQPVKDTVQEVT
KVRRNLFNQELLSPSKRSLKRGLPRSHSVSAVDGLEDKLDNFKKNKGYHKLLTKSVAETPVHKQISKRLL
HRQIKGRSSDPGPDIGVVEESPEKGDEISLRRSPRIKQLSFSRTHSASFYSVSQPKSRSVQRVHSFQQDK
SDQRENSPVQSIRSPKSLLFGAMSEMISPSEKGSARMKKRSRNTLDSEVPAAYQTPKKSHQKSLSFSKTT
PRRISHTPQTPLYTPERLQKSPAKMTPTKQAAFKESLKDSSSPGHDSPLDSKITPQKRHTQAGEGTSLET
KTPRTPKRQGTQPPGFLPNCTWPHSVNSSPESPSCPAPPTSSTAQPRRECLTPIRDPLRTPPRAAAFMGT
PQNQTHQQPHVLRAARAEEPAQKLKDKAIKTPKRPGNSTVTSSPPVTPKKLFTSPLCDVSKKSPFRKSKI
ECPSPGELDQKEPQMSPSVAASLSCPVPSTPPELSQRATLDTVPPPPPSKVGKRCRKTSDPRRSIVECQP
DASATPGVGTADSPAAPTDSRDDQKGLSLSPQSPPERRGYPGPGLRSDWHASSPLLITSDTEHVTLLSEA
EHHGIGDLKSNVLSVEEGEGLRTADAEKSSLSHPGIPPSPPSCGPGSPLMPSRDVHCTTDGRQCQASAQL
DNLPASAWHSTDSASPQTYEVELEMQASGLPKLRIKKIDPSSSLEAEPLSKEESSLGEESFLPALSMPRA
SRSLSKPEPTYVSPPCPRLSHSTPGKSRGQTYICQACTPTHGPSSTPSPFQTDGVPWTPSPKHSGKTTPD
IIKDWPRRKRAVGCGAGSSSGRGEVGADLPGSLSLLESEGKDHGLELSIHRTPILEDFELEGVCQLPDQS
PPRNSMPKAEEASSWGQFGLSSRKRVLLAKEEADRGAKRICDLREDSEVSKSKEGSPSWSAWQLPSTGDE
EVFVSGSTPPPSCAVRSCLSASALQALTQSPLLFQGKTPSSQSKDPRDEDVDVLPSTVEDSPFSRAFSRR
RPISRTYTRKKLMGTWLEDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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