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Report for CCDS10187.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10187.2 Public Homo sapiens 15 FBXL22 24 110 108 CCDS HistoryNCBI Gene:283807Re-query CCDS DB by CCDS ID:10187.2Re-query CCDS DB by GeneID:283807See the combined annotation on chromosome 15 in Sequence Viewer

Public Note for CCDS 10187.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10187.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360587.2 ENSP00000353794.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360587.2Link to Ensembl Protein Viewer:ENSP00000353794.3Re-query CCDS DB by Nucleotide ID:ENST00000360587Re-query CCDS DB by Protein ID:ENSP00000353794
Original member Current member NCBI NM_203373.3 NP_976307.2 Accepted alive Link to Nucleotide Sequence:NM_203373.3Link to Protein Sequence:NP_976307.2Re-query CCDS DB by Nucleotide ID:NM_203373Re-query CCDS DB by Protein ID:NP_976307Link to BLAST:NP_976307.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_976307.2 247 Q6P050 247 100% 0 0

Chromosomal Locations for CCDS 10187.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 63597393 63597745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63601296 63601686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGTGGCCACTGCTCACCATGCACATAACCCAGCTCAACCGGGAGTGCCTGCTGCACCTCTTCTCCTTCC
TAGACAAGGACAGCAGGAAGAGCCTTGCCAGGACCTGCTCCCAGCTCCACGACGTGTTTGAGGACCCCGC
ACTCTGGTCCCTGCTGCACTTCCGTTCCCTCACTGAACTCCAGAAGGACAACTTCCTCCTGGGCCCGGCA
CTCCGCAGCCTCTCCATCTGCTGGCACTCCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGCTCAAGA
GTGCCTTCCAGAGAAGCATCTGCAGCCGGCACGAGAGCCTGGTCAATGATTTCCTCCTCCGGGTGTGCGA
CAGGCTTTCTGCTGTGCGCTCCCCACGGAGGCGGGAGGCGCCTGCACCGTCCTCGGGGACTCCGATCGCC
GTTGGACCGAAATCACCTCGGTGGGGAGGACCTGACCACTCGGAGTTCGCCGACTTGCGCTCGGGGGTGA
CGGGGGCCAGGGCTGCCGCGCGCAGGGGTCTGGGGAGCCTCCGGGCGGAGCGACCCAGCGAGACCCCGCC
GGCTCCCGGAGTGTCCTGGGGACCGCCACCTCCAGGAGCCCCGGTGGTGATCTCGGTGAAGCAGGAGGAG
GGGAAGCAGGGGCGCACGGGCAGAAGGAGCCACCGAGCCGCTCCTCCTTGCGGTTTTGCCCGCACGCGCG
TCTGCCCGCCCACCTTTCCTGGGGCGGATGCGTTCCCGCAGTGA

Translation (247 aa):
MWPLLTMHITQLNRECLLHLFSFLDKDSRKSLARTCSQLHDVFEDPALWSLLHFRSLTELQKDNFLLGPA
LRSLSICWHSSRVQVCSIEDWLKSAFQRSICSRHESLVNDFLLRVCDRLSAVRSPRRREAPAPSSGTPIA
VGPKSPRWGGPDHSEFADLRSGVTGARAAARRGLGSLRAERPSETPPAPGVSWGPPPPGAPVVISVKQEE
GKQGRTGRRSHRAAPPCGFARTRVCPPTFPGADAFPQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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