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Report for CCDS83476.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83476.1 Public Homo sapiens X NLRP2B 24 110 108 CCDS HistoryNCBI Gene:286430Re-query CCDS DB by CCDS ID:83476.1Re-query CCDS DB by GeneID:286430See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83476.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434992.1 ENSP00000488995.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000434992.1Link to Ensembl Protein Viewer:ENSP00000488995.1Re-query CCDS DB by Nucleotide ID:ENST00000434992Re-query CCDS DB by Protein ID:ENSP00000488995
Original member Current member NCBI NM_001319967.1 NP_001306896.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001319967.1Link to Protein Sequence:NP_001306896.1Re-query CCDS DB by Nucleotide ID:NM_001319967Re-query CCDS DB by Protein ID:NP_001306896Link to BLAST:NP_001306896.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001306896.1 45 P0DMW2 45 100% 0 0

Chromosomal Locations for CCDS 83476.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 57680123 57680260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (138 nt):
ATGGTGTCTTCTGCACAGCTGGACTTCAACCTGCAGGCTCTTCTGGGACAGCTCAGCCAGGATGACTTGT
GCAAGTTCAAGTCTCTGATCAGGACCGTCTCCCTGGGAAATGAGCTGCAAAAGATCCCCCAGACATAG

Translation (45 aa):
MVSSAQLDFNLQALLGQLSQDDLCKFKSLIRTVSLGNELQKIPQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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