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Report for CCDS46790.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46790.1 Public Homo sapiens 3 EPM2AIP1 24 110 108 CCDS HistoryNCBI Gene:9852Re-query CCDS DB by CCDS ID:46790.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46790.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322716.8 ENSP00000406027.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322716.8Link to Ensembl Protein Viewer:ENSP00000406027.1Re-query CCDS DB by Nucleotide ID:ENST00000322716Re-query CCDS DB by Protein ID:ENSP00000406027
Original member Current member NCBI NM_014805.4 NP_055620.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014805.4Link to Protein Sequence:NP_055620.1Re-query CCDS DB by Nucleotide ID:NM_014805Re-query CCDS DB by Protein ID:NP_055620Link to BLAST:NP_055620.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055620.1 607 Q7L775 607 100% 0 0

Chromosomal Locations for CCDS 46790.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 36991254 36993077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1824 nt):
ATGTGGATGACGCCCAAAAGAAGCAAGATGGAAGTCGACGAGGCTCTAGTTTTCCGGCCCGAGTGGACCC
AGCGTTATTTGGTGGTGGAGCCTCCGGAGGGCGATGGGGCCCTGTGCCTGGTCTGTCGCCGCCTCATCGT
AGCTACCCGCGAACGCGACGTCAGGCGCCACTACGAGGCTGAGCACGAATACTACGAGCGGTATGTGGCG
GACGGCGAGCGCGCGGCCCTGGTGGAGCGTCTGCGTCAGGGCGACTTGCCCGTGGCCTCCTTCACTCCTG
AAGAGAGAGCTGCTCGTGCAGGCCTCGGGCTCTGCCGCCTCTTGGCCTTGAAGGGTCGCGGCTGGGGTGA
GGGGGACTTTGTATACCAGTGCATGGAGGTGTTGCTGAGAGAGGTACTGCCCGAGCATGTAAGCGTCCTG
CAAGGCGTTGACTTATCTCCAGATATCACAAGGCAGAGGATCCTGAGCATTGACAGGAATCTACGCAACC
AGCTTTTTAACCGAGCCAGGGACTTTAAAGCCTATTCTCTTGCCTTGGACGACCAGGCTTTTGTGGCCTA
TGAGAACTACCTCCTGGTCTTTATCCGCGGTGTAGGCCCTGAGTTGGAGGTGCAAGAAGATCTTCTGACC
ATAATCAACCTGACTCATCATTTCAGTGTTGGTGCGCTCATGTCGGCAATCCTAGAGTCCCTGCAGACAG
CAGGGCTTAGCTTGCAGAGAATGGTTGGACTGACCACGACCCATACTTTGAGGATGATTGGTGAGAACTC
AGGACTCGTCTCATACATGAGAGAAAAGGCCGTAAGCCCCAACTGTTGGAATGTCATTCATTATTCAGGA
TTTCTTCACTTGGAACTGTTGAGCTCCTATGATGTAGATGTTAATCAGATCATAAATACCATATCCGAAT
GGATAGTTTTGATTAAGACCAGAGGCGTTAGGCGACCTGAATTTCAGACTTTACTAACGGAATCTGAATC
AGAGCATGGTGAAAGGGTTAATGGACGATGTCTGAACAATTGGCTTAGGAGAGGGAAAACTTTAAAACTA
ATATTCTCTCTAAGAAAAGAAATGGAAGCGTTCTTGGTTTCAGTAGGGGCAACAACAGTCCACTTCTCAG
ACAAACAATGGCTTTGTGACTTTGGCTTCTTGGTGGACATTATGGAACACCTTCGAGAACTCAGTGAAGA
ATTACGAGTTAGTAAAGTCTTTGCTGCTGCTGCCTTTGACCATATTTGTACTTTCGAAGTTAAGCTGAAT
TTATTTCAAAGACATATTGAGGAAAAAAATCTAACAGACTTTCCTGCCCTCAGAGAAGTTGTTGATGAGC
TAAAACAGCAAAATAAGGAAGATGAAAAAATATTTGATCCTGATAGGTATCAAATGGTGATCTGTCGTCT
CCAAAAAGAATTTGAGAGACATTTTAAGGACCTCAGGTTCATTAAAAAGGACTTAGAACTTTTTTCAAAT
CCATTTAACTTTAAACCTGAATATGCACCTATTTCAGTGAGGGTGGAGCTAACAAAACTTCAGGCAAACA
CTAATCTTTGGAATGAATACAGAATCAAAGACTTGGGGCAGTTTTATGCTGGATTGTCTGCTGAATCCTA
CCCAATTATCAAAGGGGTTGCCTGTAAGGTGGCATCCTTGTTTGATAGTAACCAAATCTGTGAAAAGGCT
TTTTCATATTTGACTCGAAACCAACACACTTTGAGTCAGCCATTAACAGATGAGCATCTCCAAGCCCTGT
TTCGGGTTGCCACAACTGAAATGGAGCCCGGTTGGGATGACCTTGTGAGAGAAAGAAATGAATCTAATCC
ATAA

Translation (607 aa):
MWMTPKRSKMEVDEALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEAEHEYYERYVA
DGERAALVERLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQCMEVLLREVLPEHVSVL
QGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVGPELEVQEDLLT
IINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTTTHTLRMIGENSGLVSYMREKAVSPNCWNVIHYSG
FLHLELLSSYDVDVNQIINTISEWIVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKL
IFSLRKEMEAFLVSVGATTVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLN
LFQRHIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLELFSN
PFNFKPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACKVASLFDSNQICEKA
FSYLTRNQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVRERNESNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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