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Report for CCDS15119.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15119.2 Public Mus musculus 1 Nmur1 23 108 98 CCDS HistoryNCBI Gene:14767Re-query CCDS DB by CCDS ID:15119.2Re-query CCDS DB by GeneID:14767See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 15119.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000212058.1 ENSMUSP00000148767.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000212058.1Link to Ensembl Protein Viewer:ENSMUSP00000148767.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000212058Re-query CCDS DB by Protein ID:ENSMUSP00000148767
Original member Current member NCBI NM_001319227.1 NP_001306156.1 Accepted alive Link to Nucleotide Sequence:NM_001319227.1Link to Protein Sequence:NP_001306156.1Re-query CCDS DB by Nucleotide ID:NM_001319227Re-query CCDS DB by Protein ID:NP_001306156Link to BLAST:NP_001306156.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001306156.1 428 O55040 428 100% 0 0

Chromosomal Locations for CCDS 15119.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 86386325 86386713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86387313 86388207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86389342 86389344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1287 nt):
ATGACTCCTCCCTGCCTCAATTGTTCCATCTTTCCTGGAGCGCTCTCCCCAAATGCTTCAAGGAGCCCCC
TGGTCTGCAATATCAGTGAGTTCAAGTGGCCCTATCAACCTGAGGATCTGAACCTTACCGATGAGGCCCT
GAGGCTGAAGTATTTGGGGCCACAGCAGATGAAACAGTTTGTCCCCATCTGTGTCACGTACCTGCTGATC
TTCGTGGTGGGCACTCTGGGCAACGGGCTGACCTGCACCGTCATCCTGCGCAACAAGACTATGCGCACGC
CCACCAACTTCTACCTCTTCAGCCTCGCTGTGTCCGATATGCTGGTGCTCCTGGTGGGCTTGCCTCTGGA
GCTTTATGAGATGCAGCAAAATTACCCGTTCCAGCTGGGTGCGAGTGCCTGCTACTTCCGAATACTGCTC
TTAGAGACCGTCTGCCTAGCTTCAGTGCTCAATGTCACAGCCCTGAGTGTGGAGCGTTATGTGGCCGTGG
TGCGCCCACTCCAAGCCAAGTCTGTGATGACACGGGCCCATGTGCGCCGCATGGTGGGGGCCATCTGGGT
CCTCGCTACTCTCTTCTCTCTGCCCAACACCAGCCTGCATGGCCTCAGTCAACTAACTGTGCCCTGCCGG
GGGCCGGTGCCCGACTCAGCTATATGTTCGCTGGTGGGTCCCATGGACTTCTACAAGTTGGTGGTACTGA
CTACCGCACTGCTCTTCTTCTGTCTGCCCATGGTCACCATCAGTGTGCTGTATCTGCTCATTGGGCTGCG
GCTGCGGAGGGAGAGGATGTTGCTCCAAGTGGAGGTCAAGGGCAGGAAAACCGCAGCAACCCAGGAGACC
TCCCACAGAAGGATTCAGCTGCAAGATAGGGGACGGAGACAGGTGACCAAGATGCTGTTTGCACTGGTTG
TGGTATTCGGCATCTGCTGGGCTCCATTCCATGCTGACCGTATCATGTGGAGCCTGGTGTATGGACACTC
AACGGAAGGCCTGCACCTGGCCTACCAGTGTGTCCACATTGCCTCTGGCATCTTCTTCTATCTCGGCTCA
GCAGCCAACCCGGTGCTCTACAGCCTCATGTCTACTCGCTTCCGAGAGACCTTCCTGCAAGCCCTGGGCC
TTGGAACCCAGTGCTGTCATCGCCGCCAACCCTATCATGGCTCCCATAACCACATCAGGTTGACCACAGG
CAGCACCCTGTGTGACGTGGGCCACAGGAACAGCAGGGACGAACCTCTGGCTGTGAATGAGGATCCAGGG
TGTCAGCAAGAGACAGACCCCTCCTGA

Translation (428 aa):
MTPPCLNCSIFPGALSPNASRSPLVCNISEFKWPYQPEDLNLTDEALRLKYLGPQQMKQFVPICVTYLLI
FVVGTLGNGLTCTVILRNKTMRTPTNFYLFSLAVSDMLVLLVGLPLELYEMQQNYPFQLGASACYFRILL
LETVCLASVLNVTALSVERYVAVVRPLQAKSVMTRAHVRRMVGAIWVLATLFSLPNTSLHGLSQLTVPCR
GPVPDSAICSLVGPMDFYKLVVLTTALLFFCLPMVTISVLYLLIGLRLRRERMLLQVEVKGRKTAATQET
SHRRIQLQDRGRRQVTKMLFALVVVFGICWAPFHADRIMWSLVYGHSTEGLHLAYQCVHIASGIFFYLGS
AANPVLYSLMSTRFRETFLQALGLGTQCCHRRQPYHGSHNHIRLTTGSTLCDVGHRNSRDEPLAVNEDPG
CQQETDPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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