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Report for CCDS37410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37410.1 Public Mus musculus 16 Kcnj15 23 108 98 CCDS HistoryNCBI Gene:16516Re-query CCDS DB by CCDS ID:37410.1Re-query CCDS DB by GeneID:16516See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37410.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113854.7 ENSMUSP00000109485.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113854.7Link to Ensembl Protein Viewer:ENSMUSP00000109485.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113854Re-query CCDS DB by Protein ID:ENSMUSP00000109485
Original member Current member EBI ENSMUST00000113855.7 ENSMUSP00000109486.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113855.7Link to Ensembl Protein Viewer:ENSMUSP00000109486.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113855Re-query CCDS DB by Protein ID:ENSMUSP00000109486
Original member Current member EBI ENSMUST00000113856.7 ENSMUSP00000109487.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113856.7Link to Ensembl Protein Viewer:ENSMUSP00000109487.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113856Re-query CCDS DB by Protein ID:ENSMUSP00000109487
Original member Current member EBI ENSMUST00000113858.2 ENSMUSP00000109489.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113858.2Link to Ensembl Protein Viewer:ENSMUSP00000109489.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000113858Re-query CCDS DB by Protein ID:ENSMUSP00000109489
Original member Current member NCBI NM_001039056.2 NP_001034145.1 Accepted alive Link to Nucleotide Sequence:NM_001039056.2Link to Protein Sequence:NP_001034145.1Re-query CCDS DB by Nucleotide ID:NM_001039056Re-query CCDS DB by Protein ID:NP_001034145Link to BLAST:NP_001034145.1
Original member Current member NCBI NM_001271689.1 NP_001258618.1 Accepted alive Link to Nucleotide Sequence:NM_001271689.1Link to Protein Sequence:NP_001258618.1Re-query CCDS DB by Nucleotide ID:NM_001271689Re-query CCDS DB by Protein ID:NP_001258618Link to BLAST:NP_001258618.1
Original member Current member NCBI NM_001271691.1 NP_001258620.1 Accepted alive Link to Nucleotide Sequence:NM_001271691.1Link to Protein Sequence:NP_001258620.1Re-query CCDS DB by Nucleotide ID:NM_001271691Re-query CCDS DB by Protein ID:NP_001258620Link to BLAST:NP_001258620.1
Original member Current member NCBI NM_001271693.1 NP_001258622.1 Accepted alive Link to Nucleotide Sequence:NM_001271693.1Link to Protein Sequence:NP_001258622.1Re-query CCDS DB by Nucleotide ID:NM_001271693Re-query CCDS DB by Protein ID:NP_001258622Link to BLAST:NP_001258622.1
Original member Current member NCBI NM_001271695.1 NP_001258624.1 Accepted alive Link to Nucleotide Sequence:NM_001271695.1Link to Protein Sequence:NP_001258624.1Re-query CCDS DB by Nucleotide ID:NM_001271695Re-query CCDS DB by Protein ID:NP_001258624Link to BLAST:NP_001258624.1
Original member Current member NCBI NM_019664.5 NP_062638.1 Accepted alive Link to Nucleotide Sequence:NM_019664.5Link to Protein Sequence:NP_062638.1Re-query CCDS DB by Nucleotide ID:NM_019664Re-query CCDS DB by Protein ID:NP_062638Link to BLAST:NP_062638.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034145.1 375 O88932 375 100% 0 0
NP_001258618.1 375 O88932 375 100% 0 0
NP_001258620.1 375 O88932 375 100% 0 0
NP_001258622.1 375 O88932 375 100% 0 0
NP_001258624.1 375 O88932 375 100% 0 0
NP_062638.1 375 O88932 375 100% 0 0

Chromosomal Locations for CCDS 37410.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 95295602 95296729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGGATGCCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACCAACGGGGTTGGACTCAAGG
CCCACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGTAATGTGAGAATCGATAAGGTAGACGGAATCTA
TTTACTCTACCTCCAGGACTTGTGGACAACCGTCATCGACATGAAGTGGCGATACAAGCTCACCCTATTT
GCTGCCACCTTTGTGATGACCTGGTTTCTGTTTGGAGTGGTCTACTATGCCATAGCCTTTATTCATGGTG
ACTTACAACTTGGGGAATCTAATTCCAACCACACACCCTGCATTATGAAAGTGGACTCTCTCACAGGAGC
ATTCCTCTTTTCCTTGGAATCTCAGACAACCATTGGCTACGGGGTCCGTTCCATCACAGAGGAGTGTCCC
CATGCTATCTTCCTCTTAGTCGCCCAACTGGTCATCACCACATTGATTGAGATCTTCATTACGGGGACCT
TTCTGGCTAAAATTGCAAGACCCAAAAAGCGAGCCGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAG
CAAGCAGAATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCTCCTGATTCAGTGC
CAGCTCTCTGGAAAACTCCTGCAGACACACGTCACCAAAGAGGGAGAACGCATTCTCCTCAACCAGGCCA
CTGTCAAATTCCACGTGGACTCCTCTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACCTTCTACCACGT
GTTGGATGAGACAAGCCCCCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAAGGAGTTTGAGCTGGTG
GTACTTCTCAACGCCACGGTGGAGTCTACCAGCGCCGTCTGCCAGAGCCGAACGTCTTACATCCCGGAGG
AGATCTACTGGGGCTTTGAGTTTGTGCCTGTGGTTTCTCTCTCCAAAAATGGAAAGTATGTGGCTGATTT
CAGTCAATTTGAGCAGATCAGGAAGAGCCCGGATTGTACCTTCTACTGTGCCGATTCTGAGAAGCAGAAG
CTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCTGAGGAGCCTCCTGCTACAGCAGAGCA
ATGTCTGA

Translation (375 aa):
MDAIHLGMSSAPLVKHTNGVGLKAHRPRVMSKSGHSNVRIDKVDGIYLLYLQDLWTTVIDMKWRYKLTLF
AATFVMTWFLFGVVYYAIAFIHGDLQLGESNSNHTPCIMKVDSLTGAFLFSLESQTTIGYGVRSITEECP
HAIFLLVAQLVITTLIEIFITGTFLAKIARPKKRAETIKFSHCAVISKQNGKLCLVIQVANMRKSLLIQC
QLSGKLLQTHVTKEGERILLNQATVKFHVDSSSESPFLILPMTFYHVLDETSPLRDLTPQNLKEKEFELV
VLLNATVESTSAVCQSRTSYIPEEIYWGFEFVPVVSLSKNGKYVADFSQFEQIRKSPDCTFYCADSEKQK
LEEQYRQEDQRERELRSLLLQQSNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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