NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS8067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8067.1 Public Homo sapiens 11 KCNK4 24 110 108 CCDS HistoryNCBI Gene:50801Re-query CCDS DB by CCDS ID:8067.1Re-query CCDS DB by GeneID:50801See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8067.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394525.6 ENSP00000378033.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394525.6Link to Ensembl Protein Viewer:ENSP00000378033.2Re-query CCDS DB by Nucleotide ID:ENST00000394525Re-query CCDS DB by Protein ID:ENSP00000378033
Original member Current member EBI ENST00000422670.7 ENSP00000402797.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000422670.7Link to Ensembl Protein Viewer:ENSP00000402797.2Re-query CCDS DB by Nucleotide ID:ENST00000422670Re-query CCDS DB by Protein ID:ENSP00000402797
Original member Current member EBI ENST00000539216.1 ENSP00000444948.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539216.1Link to Ensembl Protein Viewer:ENSP00000444948.1Re-query CCDS DB by Nucleotide ID:ENST00000539216Re-query CCDS DB by Protein ID:ENSP00000444948
Original member Current member NCBI NM_001317090.2 NP_001304019.1 Accepted alive Link to Nucleotide Sequence:NM_001317090.2Link to Protein Sequence:NP_001304019.1Re-query CCDS DB by Nucleotide ID:NM_001317090Re-query CCDS DB by Protein ID:NP_001304019Link to BLAST:NP_001304019.1
Original member Current member NCBI NM_033310.3 NP_201567.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033310.3Link to Protein Sequence:NP_201567.1Re-query CCDS DB by Nucleotide ID:NM_033310Re-query CCDS DB by Protein ID:NP_201567Link to BLAST:NP_201567.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304019.1 393 Q9NYG8-1 393 100% 0 0
NP_201567.1 393 Q9NYG8-1 393 100% 0 0

Chromosomal Locations for CCDS 8067.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64293019 64293207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64296878 64297001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64297119 64297279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64297467 64297653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64298110 64298249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64299346 64299726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1182 nt):
ATGCGCAGCACCACGCTCCTGGCCCTGCTGGCGCTGGTCTTGCTTTACTTGGTGTCTGGTGCCCTGGTGT
TCCGGGCCCTGGAGCAGCCCCACGAGCAGCAGGCCCAGAGGGAGCTGGGGGAGGTCCGAGAGAAGTTCCT
GAGGGCCCATCCGTGTGTGAGCGACCAGGAGCTGGGCCTCCTCATCAAGGAGGTGGCTGATGCCCTGGGA
GGGGGTGCGGACCCAGAAACCAACTCGACCAGCAACAGCAGCCACTCAGCCTGGGACCTGGGCAGCGCCT
TCTTTTTCTCAGGGACCATCATCACCACCATCGGCTATGGCAATGTGGCCCTGCGCACAGATGCCGGGCG
CCTCTTCTGCATCTTTTATGCGCTGGTGGGGATTCCGCTGTTTGGGATCCTACTGGCAGGGGTCGGGGAC
CGGCTGGGCTCCTCCCTGCGCCATGGCATCGGTCACATTGAAGCCATCTTCTTGAAGTGGCACGTGCCAC
CGGAGCTAGTAAGAGTGCTGTCGGCGATGCTTTTCCTGCTGATCGGCTGCCTGCTCTTTGTCCTCACGCC
CACGTTCGTGTTCTGCTATATGGAGGACTGGAGCAAGCTGGAGGCCATCTACTTTGTCATAGTGACGCTT
ACCACCGTGGGCTTTGGCGACTATGTGGCCGGCGCGGACCCCAGGCAGGACTCCCCGGCCTATCAGCCGC
TGGTGTGGTTCTGGATCCTGCTCGGCCTGGCTTACTTCGCCTCAGTGCTCACCACCATCGGGAACTGGCT
GCGAGTAGTGTCCCGCCGCACTCGGGCAGAGATGGGCGGCCTCACGGCTCAGGCTGCCAGCTGGACTGGC
ACGGTGACAGCGCGCGTGACCCAGCGAGCCGGGCCCGCCGCCCCGCCGCCGGAGAAGGAGCAGCCACTGC
TGCCTCCACCGCCCTGTCCAGCGCAGCCGCTGGGCAGGCCCCGATCCCCTTCGCCCCCCGAGAAGGCTCA
GCCGCCTTCCCCGCCCACGGCCTCGGCCCTGGATTATCCCAGCGAGAACCTGGCCTTCATCGACGAGTCC
TCGGATACGCAGAGCGAGCGCGGCTGCCCGCTGCCCCGCGCGCCGAGAGGTCGCCGCCGCCCAAATCCCC
CCAGGAAGCCCGTGCGGCCCCGCGGCCCCGGGCGTCCCCGAGACAAAGGCGTGCCGGTGTAG

Translation (393 aa):
MRSTTLLALLALVLLYLVSGALVFRALEQPHEQQAQRELGEVREKFLRAHPCVSDQELGLLIKEVADALG
GGADPETNSTSNSSHSAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFGILLAGVGD
RLGSSLRHGIGHIEAIFLKWHVPPELVRVLSAMLFLLIGCLLFVLTPTFVFCYMEDWSKLEAIYFVIVTL
TTVGFGDYVAGADPRQDSPAYQPLVWFWILLGLAYFASVLTTIGNWLRVVSRRTRAEMGGLTAQAASWTG
TVTARVTQRAGPAAPPPEKEQPLLPPPPCPAQPLGRPRSPSPPEKAQPPSPPTASALDYPSENLAFIDES
SDTQSERGCPLPRAPRGRRRPNPPRKPVRPRGPGRPRDKGVPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH