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Report for CCDS35274.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35274.1 Public Homo sapiens X PAGE4 24 110 108 CCDS HistoryNCBI Gene:9506Re-query CCDS DB by CCDS ID:35274.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35274.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218068.7 ENSP00000218068.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000218068.7Link to Ensembl Protein Viewer:ENSP00000218068.6Re-query CCDS DB by Nucleotide ID:ENST00000218068Re-query CCDS DB by Protein ID:ENSP00000218068
Original member Current member EBI ENST00000376141.5 ENSP00000365311.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376141.5Link to Ensembl Protein Viewer:ENSP00000365311.1Re-query CCDS DB by Nucleotide ID:ENST00000376141Re-query CCDS DB by Protein ID:ENSP00000365311
Original member Current member NCBI NM_001318877.1 NP_001305806.1 Accepted alive Link to Nucleotide Sequence:NM_001318877.1Link to Protein Sequence:NP_001305806.1Re-query CCDS DB by Nucleotide ID:NM_001318877Re-query CCDS DB by Protein ID:NP_001305806Link to BLAST:NP_001305806.1
Original member Current member NCBI NM_007003.4 NP_008934.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007003.4Link to Protein Sequence:NP_008934.1Re-query CCDS DB by Nucleotide ID:NM_007003Re-query CCDS DB by Protein ID:NP_008934Link to BLAST:NP_008934.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305806.1 102 O60829 102 100% 0 0
NP_008934.1 102 O60829 102 100% 0 0

Chromosomal Locations for CCDS 35274.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 49830429 49830506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49830997 49831084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49832525 49832650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49833846 49833862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGAGTGCACGAGTGAGATCAAGATCCAGAGGAAGAGGAGATGGTCAGGAGGCTCCCGATGTGGTTGCAT
TCGTGGCTCCCGGTGAATCTCAGCAAGAGGAACCACCAACTGACAATCAGGATATTGAACCTGGACAAGA
GAGAGAAGGAACACCTCCGATCGAAGAACGTAAAGTAGAAGGTGATTGCCAGGAAATGGATCTGGAAAAG
ACTCGGAGTGAGCGTGGAGATGGCTCTGATGTAAAAGAGAAGACTCCACCTAATCCTAAGCATGCTAAGA
CTAAAGAAGCAGGAGATGGGCAGCCATAA

Translation (102 aa):
MSARVRSRSRGRGDGQEAPDVVAFVAPGESQQEEPPTDNQDIEPGQEREGTPPIEERKVEGDCQEMDLEK
TRSERGDGSDVKEKTPPNPKHAKTKEAGDGQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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