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Report for CCDS32085.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32085.1 Public Homo sapiens 14 MAPK1IP1L 24 110 108 CCDS HistoryNCBI Gene:93487Re-query CCDS DB by CCDS ID:32085.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32085.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395468.9 ENSP00000378851.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395468.9Link to Ensembl Protein Viewer:ENSP00000378851.3Re-query CCDS DB by Nucleotide ID:ENST00000395468Re-query CCDS DB by Protein ID:ENSP00000378851
Original member Current member EBI ENST00000622254.1 ENSP00000481882.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622254.1Link to Ensembl Protein Viewer:ENSP00000481882.1Re-query CCDS DB by Nucleotide ID:ENST00000622254Re-query CCDS DB by Protein ID:ENSP00000481882
Original member Current member NCBI NM_144578.4 NP_653179.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144578.4Link to Protein Sequence:NP_653179.1Re-query CCDS DB by Nucleotide ID:NM_144578Re-query CCDS DB by Protein ID:NP_653179Link to BLAST:NP_653179.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653179.1 245 Q8NDC0 245 100% 0 0

Chromosomal Locations for CCDS 32085.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55061684 55061701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55062618 55063325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55064616 55064627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (738 nt):
ATGTCTGATGAATTTTCGTTGGCAGATGCACTACCTGAACACTCCCCTGCCAAAACCTCTGCTGTGAGCA
ATACAAAACCTGGCCAACCTCCTCAAGGCTGGCCAGGCTCCAACCCTTGGAATAATCCGAGTGCTCCATC
TTCAGTGCCATCTGGACTCCCACCAAGTGCAACACCCTCCACTGTGCCTTTTGGACCAGCACCAACAGGA
ATGTATCCCTCCGTGCCTCCCACCGGACCACCTCCAGGACCCCCAGCACCCTTTCCTCCTTCCGGACCAT
CATGTCCCCCACCTGGTGGTCCTTATCCAGCCCCAACTGTGCCGGGCCCTGGCCCCACAGGGCCATATCC
TACACCAAATATGCCCTTTCCAGAGCTACCCAGACCATATGGTGCACCCACAGATCCAGCTGCAGCTGGT
CCTTTAGGTCCATGGGGATCCATGTCTTCTGGACCTTGGGCGCCAGGAATGGGAGGGCAGTATCCTACCC
CTAATATGCCATATCCATCTCCAGGCCCATATCCCGCTCCTCCTCCTCCCCAAGCCCCTGGGGCAGCACC
ACCTGTTCCATGGGGCACCGTTCCACCAGGAGCCTGGGGACCACCAGCACCATATCCTGCCCCTACAGGA
TCGTATCCCACACCAGGACTCTATCCTACTCCCAGTAATCCTTTCCAAGTGCCTTCAGGACCTTCTGGTG
CTCCACCAATGCCTGGTGGCCCCCATTCTTACCATTAA

Translation (245 aa):
MSDEFSLADALPEHSPAKTSAVSNTKPGQPPQGWPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPAPTG
MYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAG
PLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTG
SYPTPGLYPTPSNPFQVPSGPSGAPPMPGGPHSYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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