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Report for CCDS42090.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42090.1 Public Homo sapiens 16 METTL26 24 110 108 CCDS HistoryNCBI Gene:84326Re-query CCDS DB by CCDS ID:42090.1Re-query CCDS DB by GeneID:84326See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42090.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397665.6 ENSP00000444460.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397665.6Link to Ensembl Protein Viewer:ENSP00000444460.2Re-query CCDS DB by Nucleotide ID:ENST00000397665Re-query CCDS DB by Protein ID:ENSP00000444460
Original member Current member NCBI NM_001040165.3 NP_001035255.1 Accepted alive Link to Nucleotide Sequence:NM_001040165.3Link to Protein Sequence:NP_001035255.1Re-query CCDS DB by Nucleotide ID:NM_001040165Re-query CCDS DB by Protein ID:NP_001035255Link to BLAST:NP_001035255.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035255.1 185 Q96S19-6 185 100% 0 0

Chromosomal Locations for CCDS 42090.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 634526 634644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 634719 634797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 635612 635774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 636094 636290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGCTGGTGGCGGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGATC
CGGCCCAGCGTGGCGTCCGCGTCCTCGAGGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCG
GGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGCATCGCGGCCACC
ACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTGGGGCTGGGAGCACT
GGGGCGGGATCCTGCCACAGTCGCTGGACCTGTTGCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCG
CTGCACGGAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGAAAGGCCAGTGG
CCTGCTCCTGGAGAGGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAGCC
CCTCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAG

Translation (185 aa):
MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVDQRCLDSIAAT
TQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTEEPRMGASGHSPPGGPGKGQW
PAPGEDGGHASQQQMPDLPEKLSPSFTPAHLHPCRRLCEARTLPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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