NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32056.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32056.1 Public Homo sapiens 14 CIDEB 24 110 108 CCDS HistoryNCBI Gene:27141Re-query CCDS DB by CCDS ID:32056.1Re-query CCDS DB by GeneID:27141See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32056.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258807.5 ENSP00000258807.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000258807.5Link to Ensembl Protein Viewer:ENSP00000258807.5Re-query CCDS DB by Nucleotide ID:ENST00000258807Re-query CCDS DB by Protein ID:ENSP00000258807
Original member Current member EBI ENST00000336557.9 ENSP00000337731.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336557.9Link to Ensembl Protein Viewer:ENSP00000337731.5Re-query CCDS DB by Nucleotide ID:ENST00000336557Re-query CCDS DB by Protein ID:ENSP00000337731
Original member Current member EBI ENST00000554411.6 ENSP00000451089.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000554411.6Link to Ensembl Protein Viewer:ENSP00000451089.1Re-query CCDS DB by Nucleotide ID:ENST00000554411Re-query CCDS DB by Protein ID:ENSP00000451089
Original member Current member NCBI NM_001318807.3 NP_001305736.1 Accepted alive Link to Nucleotide Sequence:NM_001318807.3Link to Protein Sequence:NP_001305736.1Re-query CCDS DB by Nucleotide ID:NM_001318807Re-query CCDS DB by Protein ID:NP_001305736Link to BLAST:NP_001305736.1
Original member Current member NCBI NM_001393334.1 NP_001380263.1 Accepted alive Link to Nucleotide Sequence:NM_001393334.1Link to Protein Sequence:NP_001380263.1Re-query CCDS DB by Nucleotide ID:NM_001393334Re-query CCDS DB by Protein ID:NP_001380263Link to BLAST:NP_001380263.1
Original member Current member NCBI NM_001393335.1 NP_001380264.1 Accepted alive Link to Nucleotide Sequence:NM_001393335.1Link to Protein Sequence:NP_001380264.1Re-query CCDS DB by Nucleotide ID:NM_001393335Re-query CCDS DB by Protein ID:NP_001380264Link to BLAST:NP_001380264.1
Original member Current member NCBI NM_001393336.1 NP_001380265.1 Accepted alive Link to Nucleotide Sequence:NM_001393336.1Link to Protein Sequence:NP_001380265.1Re-query CCDS DB by Nucleotide ID:NM_001393336Re-query CCDS DB by Protein ID:NP_001380265Link to BLAST:NP_001380265.1
Original member Current member NCBI NM_001393337.1 NP_001380266.1 Accepted alive Link to Nucleotide Sequence:NM_001393337.1Link to Protein Sequence:NP_001380266.1Re-query CCDS DB by Nucleotide ID:NM_001393337Re-query CCDS DB by Protein ID:NP_001380266Link to BLAST:NP_001380266.1
Original member Current member NCBI NM_001393338.1 NP_001380267.1 Accepted alive Link to Nucleotide Sequence:NM_001393338.1Link to Protein Sequence:NP_001380267.1Re-query CCDS DB by Nucleotide ID:NM_001393338Re-query CCDS DB by Protein ID:NP_001380267Link to BLAST:NP_001380267.1
Original member Current member NCBI NM_001393339.1 NP_001380268.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393339.1Link to Protein Sequence:NP_001380268.1Re-query CCDS DB by Nucleotide ID:NM_001393339Re-query CCDS DB by Protein ID:NP_001380268Link to BLAST:NP_001380268.1
Original member Current member NCBI NM_014430.4 NP_055245.2 Accepted alive Link to Nucleotide Sequence:NM_014430.4Link to Protein Sequence:NP_055245.2Re-query CCDS DB by Nucleotide ID:NM_014430Re-query CCDS DB by Protein ID:NP_055245Link to BLAST:NP_055245.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305736.1 219 Q9UHD4 219 100% 0 0
NP_001380263.1 219 Q9UHD4 219 100% 0 0
NP_001380264.1 219 Q9UHD4 219 100% 0 0
NP_001380265.1 219 Q9UHD4 219 100% 0 0
NP_001380266.1 219 Q9UHD4 219 100% 0 0
NP_001380267.1 219 Q9UHD4 219 100% 0 0
NP_001380268.1 219 Q9UHD4 219 100% 0 0
NP_055245.2 219 Q9UHD4 219 100% 0 0

Chromosomal Locations for CCDS 32056.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24305633 24305765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24305947 24306137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24306374 24306523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24307371 24307515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24307818 24307858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (660 nt):
ATGGAGTACCTCTCAGCTCTGAACCCCAGTGACTTACTCAGGTCAGTATCTAATATAAGCTCGGAGTTTG
GACGGAGGGTCTGGACCTCAGCTCCACCACCCCAGCGACCTTTCCGTGTCTGTGATCACAAGCGGACCAT
CCGGAAAGGCCTGACAGCTGCCACCCGCCAGGAGCTGCTAGCCAAAGCATTGGAGACCCTACTGCTGAAT
GGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTGGACAGTGAGGACTTCTTCCAGCTGCTGG
AGGATGACACGTGCCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGAGTGGAGTGCTGTC
ATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAG
CAAAACCCTCGAGACCTCTTTGGCAGCCTGAATGTCAAAGCCACATTCTACGGGCTCTACTCTATGAGTT
GTGACTTTCAAGGACTTGGCCCAAAGAAAGTACTCAGGGAGCTCCTTCGTTGGACCTCCACACTGCTGCA
AGGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGGGGCTGAGCAGTGG
CAGCAGAAGGGCCGCCTCCATTCCTACTAA

Translation (219 aa):
MEYLSALNPSDLLRSVSNISSEFGRRVWTSAPPPQRPFRVCDHKRTIRKGLTAATRQELLAKALETLLLN
GVLTLVLEEDGTAVDSEDFFQLLEDDTCLMVLQSGQSWSPTRSGVLSYGLGRERPKHSKDIARFTFDVYK
QNPRDLFGSLNVKATFYGLYSMSCDFQGLGPKKVLRELLRWTSTLLQGLGHMLLGISSTLRHAVEGAEQW
QQKGRLHSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH