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Report for CCDS8211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8211.1 Public Homo sapiens 11 FOLR1 24 110 108 CCDS HistoryNCBI Gene:2348Re-query CCDS DB by CCDS ID:8211.1Re-query CCDS DB by GeneID:2348See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8211.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312293.9 ENSP00000308137.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312293.9Link to Ensembl Protein Viewer:ENSP00000308137.4Re-query CCDS DB by Nucleotide ID:ENST00000312293Re-query CCDS DB by Protein ID:ENSP00000308137
Original member Current member EBI ENST00000393676.5 ENSP00000377281.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393676.5Link to Ensembl Protein Viewer:ENSP00000377281.3Re-query CCDS DB by Nucleotide ID:ENST00000393676Re-query CCDS DB by Protein ID:ENSP00000377281
Original member Current member EBI ENST00000393679.5 ENSP00000377284.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393679.5Link to Ensembl Protein Viewer:ENSP00000377284.1Re-query CCDS DB by Nucleotide ID:ENST00000393679Re-query CCDS DB by Protein ID:ENSP00000377284
Original member Current member EBI ENST00000393681.6 ENSP00000377286.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393681.6Link to Ensembl Protein Viewer:ENSP00000377286.2Re-query CCDS DB by Nucleotide ID:ENST00000393681Re-query CCDS DB by Protein ID:ENSP00000377286
Original member Current member EBI ENST00000675784.1 ENSP00000502440.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675784.1Link to Ensembl Protein Viewer:ENSP00000502440.1Re-query CCDS DB by Nucleotide ID:ENST00000675784Re-query CCDS DB by Protein ID:ENSP00000502440
Original member Current member NCBI NM_000802.3 NP_000793.1 Accepted alive Link to Nucleotide Sequence:NM_000802.3Link to Protein Sequence:NP_000793.1Re-query CCDS DB by Nucleotide ID:NM_000802Re-query CCDS DB by Protein ID:NP_000793Link to BLAST:NP_000793.1
Original member Current member NCBI NM_016724.3 NP_057936.1 Accepted alive Link to Nucleotide Sequence:NM_016724.3Link to Protein Sequence:NP_057936.1Re-query CCDS DB by Nucleotide ID:NM_016724Re-query CCDS DB by Protein ID:NP_057936Link to BLAST:NP_057936.1
Original member Current member NCBI NM_016725.3 NP_057937.1 Accepted alive Link to Nucleotide Sequence:NM_016725.3Link to Protein Sequence:NP_057937.1Re-query CCDS DB by Nucleotide ID:NM_016725Re-query CCDS DB by Protein ID:NP_057937Link to BLAST:NP_057937.1
Original member Current member NCBI NM_016729.3 NP_057941.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016729.3Link to Protein Sequence:NP_057941.1Re-query CCDS DB by Nucleotide ID:NM_016729Re-query CCDS DB by Protein ID:NP_057941Link to BLAST:NP_057941.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000793.1 257 P15328 257 100% 0 0
NP_057936.1 257 P15328 257 100% 0 0
NP_057937.1 257 P15328 257 100% 0 0
NP_057941.1 257 P15328 257 100% 0 0

Chromosomal Locations for CCDS 8211.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 72192174 72192341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72195271 72195459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72195612 72195747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72195897 72196177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGGCTCAGCGGATGACAACACAGCTGCTGCTCCTTCTAGTGTGGGTGGCTGTAGTAGGGGAGGCTCAGA
CAAGGATTGCATGGGCCAGGACTGAGCTTCTCAATGTCTGCATGAACGCCAAGCACCACAAGGAAAAGCC
AGGCCCCGAGGACAAGTTGCATGAGCAGTGTCGACCCTGGAGGAAGAATGCCTGCTGTTCTACCAACACC
AGCCAGGAAGCCCATAAGGATGTTTCCTACCTATATAGATTCAACTGGAACCACTGTGGAGAGATGGCAC
CTGCCTGCAAACGGCATTTCATCCAGGACACCTGCCTCTACGAGTGCTCCCCCAACTTGGGGCCCTGGAT
CCAGCAGGTGGATCAGAGCTGGCGCAAAGAGCGGGTACTGAACGTGCCCCTGTGCAAAGAGGACTGTGAG
CAATGGTGGGAAGATTGTCGCACCTCCTACACCTGCAAGAGCAACTGGCACAAGGGCTGGAACTGGACTT
CAGGGTTTAACAAGTGCGCAGTGGGAGCTGCCTGCCAACCTTTCCATTTCTACTTCCCCACACCCACTGT
TCTGTGCAATGAAATCTGGACTCACTCCTACAAGGTCAGCAACTACAGCCGAGGGAGTGGCCGCTGCATC
CAGATGTGGTTCGACCCAGCCCAGGGCAACCCCAATGAGGAGGTGGCGAGGTTCTATGCTGCAGCCATGA
GTGGGGCTGGGCCCTGGGCAGCCTGGCCTTTCCTGCTTAGCCTGGCCCTAATGCTGCTGTGGCTGCTCAG
CTGA

Translation (257 aa):
MAQRMTTQLLLLLVWVAVVGEAQTRIAWARTELLNVCMNAKHHKEKPGPEDKLHEQCRPWRKNACCSTNT
SQEAHKDVSYLYRFNWNHCGEMAPACKRHFIQDTCLYECSPNLGPWIQQVDQSWRKERVLNVPLCKEDCE
QWWEDCRTSYTCKSNWHKGWNWTSGFNKCAVGAACQPFHFYFPTPTVLCNEIWTHSYKVSNYSRGSGRCI
QMWFDPAQGNPNEEVARFYAAAMSGAGPWAAWPFLLSLALMLLWLLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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