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Report for CCDS85750.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85750.1 Public Mus musculus X Fundc1 23 108 98 CCDS HistoryNCBI Gene:72018Re-query CCDS DB by CCDS ID:85750.1Re-query CCDS DB by GeneID:72018See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85750.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000176638.7 ENSMUSP00000135183.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176638.7Link to Ensembl Protein Viewer:ENSMUSP00000135183.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176638Re-query CCDS DB by Protein ID:ENSMUSP00000135183
Original member Current member NCBI NM_001313745.1 NP_001300674.1 Accepted alive Link to Nucleotide Sequence:NM_001313745.1Link to Protein Sequence:NP_001300674.1Re-query CCDS DB by Nucleotide ID:NM_001313745Re-query CCDS DB by Protein ID:NP_001300674Link to BLAST:NP_001300674.1

Chromosomal Locations for CCDS 85750.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 17557934 17558011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17568033 17568108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17571303 17571459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17572153 17572180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGGCATCCCGGAACCCCCCTCCCCAAGACTATGAAAGCGATGACGAATCATACGAAGTGTTGGATTTAA
CTGAATATGCAAGAAGACACCACTGGTGGAATCGAGTATTTGGCCACAGTTCCGGACCTATGGTAGAAAA
ATACTCAGTAGCTACTCAGATTGTAATGGGTGGCGTGACTGGCTGGTGTGCAGGATTTTTATTCCAGAAG
GTTGGAAAACTTGCTGCAACTGCAGTAGGTGGTGGTTTCCTTCTTCTTCAGGCAACAGACTTTATCAAGC
AGAACATTGTGATATCCAGCGGCTTCGTGGGAGGCTTTTTGCTAGGCCTGGCATCTTAA

Translation (112 aa):
MASRNPPPQDYESDDESYEVLDLTEYARRHHWWNRVFGHSSGPMVEKYSVATQIVMGGVTGWCAGFLFQK
VGKLAATAVGGGFLLLQATDFIKQNIVISSGFVGGFLLGLAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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