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Report for CCDS10610.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10610.1 Public Homo sapiens 16 COG7 24 110 108 CCDS HistoryNCBI Gene:91949Re-query CCDS DB by CCDS ID:10610.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10610.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307149.10 ENSP00000305442.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307149.10Link to Ensembl Protein Viewer:ENSP00000305442.5Re-query CCDS DB by Nucleotide ID:ENST00000307149Re-query CCDS DB by Protein ID:ENSP00000305442
Original member Current member NCBI NM_153603.4 NP_705831.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153603.4Link to Protein Sequence:NP_705831.1Re-query CCDS DB by Nucleotide ID:NM_153603Re-query CCDS DB by Protein ID:NP_705831Link to BLAST:NP_705831.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705831.1 770 P83436 770 100% 0 0

Chromosomal Locations for CCDS 10610.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 23388920 23389086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23392380 23392523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23393233 23393347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23398046 23398129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23403694 23403834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23406076 23406262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23410295 23410360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23413448 23413564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23416967 23417121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23418700 23418827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23424749 23424947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23433545 23433667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23434636 23434718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23442477 23442645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23445048 23445164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23445813 23445961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23452826 23452994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2313 nt):
ATGGACTTCTCCAAGTTCCTGGCAGACGACTTCGACGTGAAGGAGTGGATCAATGCGGCCTTCAGGGCCG
GCTCCAAGGAGGCGGCGTCCGGGAAGGCGGATGGCCACGCAGCCACCCTGGTGATGAAGCTGCAGCTGTT
CATCCAAGAGGTGAACCACGCCGTGGAGGAAACAAGTCACCAAGCTCTCCAGAACATGCCCAAAGTGCTC
CGTGATGTTGAAGCCCTAAAACAGGAGGCATCTTTCCTGAAAGAACAGATGATTCTTGTCAAGGAGGACA
TTAAAAAATTTGAACAGGACACATCTCAATCCATGCAGGTGTTGGTAGAAATTGACCAAGTGAAGTCCAG
AATGCAACTTGCTGCCGAATCTCTTCAGGAAGCAGATAAGTGGAGCACGTTGAGCGCCGATATTGAGGAG
ACATTTAAGACTCAGGACATAGCTGTGATTTCTGCCAAGCTAACAGGTATGCAGAACAGCTTAATGATGC
TTGTTGATACACCAGACTACTCAGAAAAGTGTGTGCACTTGGAGGCACTGAAGAACAGGCTGGAGGCCCT
AGCCAGTCCACAGATTGTAGCGGCATTCACCTCTCAGGCTGTAGATCAGTCCAAAGTGTTTGTGAAGGTG
TTTACTGAAATTGACCGGATGCCCCAGCTCCTGGCCTACTACTACAAGTGTCACAAGGTGCAGCTTTTAG
CAGCCTGGCAAGAGCTGTGTCAAAGTGACCTATCCCTGGACCGGCAGCTTACCGGACTCTATGATGCCTT
GCTTGGTGCTTGGCACACACAAATCCAGTGGGCTACACAGGTTTTCCAGAAGCCCCACGAGGTGGTAATG
GTGCTGCTGATTCAGACCCTGGGGGCCCTCATGCCCTCGCTGCCCTCCTGCCTCAGCAACGGCGTGGAGA
GGGCAGGGCCCGAGCAGGAGCTCACCAGGCTGCTGGAGTTCTACGACGCCACCGCCCACTTCGCCAAGGG
CTTGGAGATGGCACTGCTCCCCCACCTACATGAACACAATCTGGTAAAAGTCACGGAGCTGGTGGATGCT
GTGTATGATCCATACAAACCCTACCAGCTGAAGTATGGCGACATGGAAGAGAGCAACCTCCTCATCCAGA
TGAGTGCTGTGCCTCTGGAGCATGGGGAAGTGATTGACTGTGTGCAGGAGCTGAGCCACTCCGTGAACAA
GCTGTTTGGTCTGGCGTCTGCAGCCGTTGACAGATGCGTCAGATTCACCAATGGCCTGGGGACCTGCGGC
CTGTTGTCAGCCCTGAAATCCCTCTTTGCCAAGTATGTGTCTGATTTCACCAGCACTCTCCAGTCCATAC
GAAAGAAGTGCAAACTGGACCACATTCCTCCCAACTCCCTCTTCCAGGAAGATTGGACGGCTTTTCAGAA
CTCCATTAGGATAATAGCCACCTGTGGAGAGCTTTTGCGGCATTGTGGGGACTTCGAGCAGCAGCTAGCC
AACAGGATTTTGTCCACAGCTGGGAAGTATCTATCTGATTCCTGCAGCCCCCGGAGCCTGGCTGGTTTTC
AGGAGAGCATCTTGACAGACAAGAAGAACTCTGCCAAGAACCCATGGCAAGAATATAATTACCTCCAGAA
AGATAACCCTGCTGAATATGCCAGTTTAATGGAAATACTTTATACCCTTAAGGAAAAAGGGTCAAGCAAC
CACAACCTGCTGGCTGCACCTCGAGCAGCGCTGACTCGGCTTAACCAGCAGGCCCACCAGCTGGCTTTCG
ATTCCGTGTTCCTGCGCATCAAACAACAGCTGTTGCTTATTTCGAAGATGGACAGCTGGAATACGGCTGG
CATCGGAGAAACCCTCACAGATGAACTGCCCGCCTTTAGTCTCACCCCTCTCGAGTACATCAGCAACATC
GGGCAGTACATCATGTCCCTCCCCCTGAATCTTGAGCCATTTGTGACTCAGGAGGACTCTGCCTTAGAGT
TGGCATTGCACGCTGGAAAGCTGCCATTTCCTCCTGAGCAGGGGGATGAATTGCCCGAGCTGGACAACAT
GGCTGACAACTGGCTGGGCTCGATCGCCAGAGCCACAATGCAGACCTACTGTGATGCGATCCTACAGATC
CCTGAGCTGAGCCCACACTCTGCCAAGCAGCTGGCCACTGACATCGACTATCTGATCAACGTGATGGATG
CCCTGGGCCTGCAGCCGTCCCGCACCCTCCAGCACATCGTGACGCTACTGAAGACCAGGCCTGAGGACTA
TAGACAGGTCAGCAAAGGCCTGCCCCGTCGCCTGGCCACCACCGTGGCCACCATGCGGAGTGTGAATTAC
TGA

Translation (770 aa):
MDFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSHQALQNMPKVL
RDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEE
TFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLEALASPQIVAAFTSQAVDQSKVFVKV
FTEIDRMPQLLAYYYKCHKVQLLAAWQELCQSDLSLDRQLTGLYDALLGAWHTQIQWATQVFQKPHEVVM
VLLIQTLGALMPSLPSCLSNGVERAGPEQELTRLLEFYDATAHFAKGLEMALLPHLHEHNLVKVTELVDA
VYDPYKPYQLKYGDMEESNLLIQMSAVPLEHGEVIDCVQELSHSVNKLFGLASAAVDRCVRFTNGLGTCG
LLSALKSLFAKYVSDFTSTLQSIRKKCKLDHIPPNSLFQEDWTAFQNSIRIIATCGELLRHCGDFEQQLA
NRILSTAGKYLSDSCSPRSLAGFQESILTDKKNSAKNPWQEYNYLQKDNPAEYASLMEILYTLKEKGSSN
HNLLAAPRAALTRLNQQAHQLAFDSVFLRIKQQLLLISKMDSWNTAGIGETLTDELPAFSLTPLEYISNI
GQYIMSLPLNLEPFVTQEDSALELALHAGKLPFPPEQGDELPELDNMADNWLGSIARATMQTYCDAILQI
PELSPHSAKQLATDIDYLINVMDALGLQPSRTLQHIVTLLKTRPEDYRQVSKGLPRRLATTVATMRSVNY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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