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Report for CCDS10377.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10377.1 Public Homo sapiens 15 ARRDC4 24 110 108 CCDS HistoryNCBI Gene:91947Re-query CCDS DB by CCDS ID:10377.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10377.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268042.7 ENSP00000268042.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268042.7Link to Ensembl Protein Viewer:ENSP00000268042.6Re-query CCDS DB by Nucleotide ID:ENST00000268042Re-query CCDS DB by Protein ID:ENSP00000268042
Original member Current member NCBI NM_183376.3 NP_899232.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_183376.3Link to Protein Sequence:NP_899232.2Re-query CCDS DB by Nucleotide ID:NM_183376Re-query CCDS DB by Protein ID:NP_899232Link to BLAST:NP_899232.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_899232.2 418 Q8NCT1 418 100% 0 0

Chromosomal Locations for CCDS 10377.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 97960862 97961168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 97965600 97965666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 97965895 97966042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 97968014 97968116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 97969123 97969379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 97969883 97970045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 97970589 97970743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 97971131 97971187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1257 nt):
ATGGGCGGGGAGGCTGGGTGCGCGGCGGCCGTGGGTGCCGAGGGCCGCGTGAAGAGCCTGGGTCTGGTGT
TCGAGGACGAGCGCAAGGGCTGCTATTCCAGCGGCGAGACAGTGGCCGGGCACGTGCTGCTGGAGGCGTC
CGAGCCGGTGGCCCTGCGCGCGCTGCGCCTGGAGGCCCAGGGGCGCGCCACCGCCGCCTGGGGCCCGAGC
ACCTGCCCCCGCGCCTCGGCCAGCACCGCGGCCCTGGCTGTCTTCTCGGAGGTGGAGTACCTGAACGTGC
GCCTCAGCCTGCGGGAGCCCCCGGCCGGTGAAGGCATCATTTTATTACAGCCTGGAAAACATGAATTTCC
ATTTCGCTTTCAACTTCCATCTGAACCTTTGGTCACCTCGTTTACTGGGAAATATGGAAGCATTCAGTAC
TGTGTGCGGGCAGTGTTGGAACGACCCAAGGTACCTGATCAGAGTGTAAAGCGGGAACTCCAGGTTGTTA
GTCATGTCGATGTCAACACACCAGCATTATTAACCCCTGTATTGAAAACTCAAGAGAAAATGGTTGGCTG
TTGGTTTTTCACTTCTGGTCCAGTCTCGCTGAGTGCCAAAATTGAAAGAAAGGGATACTGTAATGGAGAA
GCTATTCCAATCTATGCAGAAATAGAAAATTGTTCCTCTCGTCTGATTGTTCCAAAGGCTGCTATTTTCC
AAACGCAGACATATTTGGCTAGTGGAAAAACAAAGACCATTCGACACATGGTCGCCAATGTGCGAGGAAA
CCACATCGCTTCTGGGAGCACAGACACATGGAATGGGAAAACGCTAAAAATCCCACCTGTTACTCCATCC
ATCCTGGATTGCTGCATTATCAGAGTGGACTATTCCTTAGCTGTATACATTCACATTCCTGGTGCTAAAA
AATTGATGCTCGAACTGCCATTAGTGATCGGTACAATTCCATATAATGGTTTTGGCAGCAGAAACTCCAG
CATTGCCAGCCAGTTCAGTATGGATATGAGCTGGTTGACACTGACCCTGCCAGAGCAGCCTGAAGCACCA
CCAAATTATGCAGATGTGGTATCAGAGGAAGAATTCTCTAGACACATTCCTCCTTACCCTCAACCCCCTA
ACTGTGAGGGAGAAGTGTGCTGTCCTGTGTTTGCCTGTATACAAGAATTCCGGTTTCAACCCCCACCTCT
TTATTCAGAGGTTGACCCACATCCTAGCGACGTAGAAGAGAGCCAGCCTGTTTCCTTCATTCTCTGA

Translation (418 aa):
MGGEAGCAAAVGAEGRVKSLGLVFEDERKGCYSSGETVAGHVLLEASEPVALRALRLEAQGRATAAWGPS
TCPRASASTAALAVFSEVEYLNVRLSLREPPAGEGIILLQPGKHEFPFRFQLPSEPLVTSFTGKYGSIQY
CVRAVLERPKVPDQSVKRELQVVSHVDVNTPALLTPVLKTQEKMVGCWFFTSGPVSLSAKIERKGYCNGE
AIPIYAEIENCSSRLIVPKAAIFQTQTYLASGKTKTIRHMVANVRGNHIASGSTDTWNGKTLKIPPVTPS
ILDCCIIRVDYSLAVYIHIPGAKKLMLELPLVIGTIPYNGFGSRNSSIASQFSMDMSWLTLTLPEQPEAP
PNYADVVSEEEFSRHIPPYPQPPNCEGEVCCPVFACIQEFRFQPPPLYSEVDPHPSDVEESQPVSFIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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