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Report for CCDS11572.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11572.1 Public Homo sapiens 17 ANKRD40 24 110 108 CCDS HistoryNCBI Gene:91369Re-query CCDS DB by CCDS ID:11572.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11572.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285243.7 ENSP00000285243.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000285243.7Link to Ensembl Protein Viewer:ENSP00000285243.6Re-query CCDS DB by Nucleotide ID:ENST00000285243Re-query CCDS DB by Protein ID:ENSP00000285243
Original member Current member NCBI NM_052855.4 NP_443087.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052855.4Link to Protein Sequence:NP_443087.1Re-query CCDS DB by Nucleotide ID:NM_052855Re-query CCDS DB by Protein ID:NP_443087Link to BLAST:NP_443087.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443087.1 368 Q6AI12 368 100% 0 0

Chromosomal Locations for CCDS 11572.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 50695997 50696143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50696940 50697121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50699399 50699893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50700568 50700716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50707521 50707654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1107 nt):
ATGAACGCCCTCCTAGAGCAGAAGGAGCAGCAGGAGAGGCTGCGGGAGGCCGCGGCCTTAGGGGACATTC
GGGAGGTGCAGAAACTGGTGGAGAGCGGGGTGGATGTGAACTCCCAAAATGAGGTCAACGGCTGGACTTG
TTTACACTGGGCATGTAAACGAAACCATGGTCAGGTGGTCTCTTACCTGTTAAAATCAGGAGCTGACAAA
GAAATTCTTACCACAAAAGGAGAAATGCCAGTCCAGTTAACATCAAGGAGAGAAATCAGGAAGATTATGG
GAGTGGAAGAAGAAGATGATGATGATGATGATGATGACAACCTCCCCCAGCTGAAGAAGGAGTCAGAACT
GCCCTTTGTTCCCAACTATTTGGCCAACCCAGCCTTCCCTTTTATCTATACACCCACAGCAGAGGATTCA
GCCCAGATGCAGAATGGGGGCCCCTCCACACCCCCTGCATCACCCCCTGCAGATGGCTCACCTCCATTGC
TTCCCCCTGGGGAACCTCCCCTGTTAGGGACCTTTCCCCGGGACCACACCTCTTTGGCACTAGTTCAGAA
TGGTGATGTGTCGGCCCCCTCTGCCATACTCAGAACACCAGAAAGCACAAAACCGGGTCCTGTTTGTCAG
CCACCAGTGAGTCAGAGCCGCTCCCTGTTTTCTTCTGTCCCGTCCAAGCCACCAATGTCTCTGGAGCCTC
AAAATGGGACGTATGCAGGACCAGCGCCAGCATTCCAGCCATTTTTCTTCACTGGAGCATTTCCATTTAA
TATGCAAGAGCTGGTACTCAAGGTGAGAATTCAGAACCCATCTCTTCGAGAAAATGATTTCATTGAAATT
GAACTGGACCGACAGGAGCTCACCTACCAAGAGTTGCTCAGAGTGTGTTGCTGTGAGCTGGGTGTTAATC
CAGATCAAGTGGAGAAGATCAGAAAGTTACCCAATACTCTGTTAAGGAAGGACAAGGATGTTGCTCGACT
CCAAGATTTCCAGGAGCTGGAACTGGTTCTGATGATAAGTGAAAATAATTTTCTGTTCAGAAATGCTGCA
TCCACACTGACTGAAAGGCCTTGCTATAACAGGAGAGCTTCAAAACTGACTTACTAA

Translation (368 aa):
MNALLEQKEQQERLREAAALGDIREVQKLVESGVDVNSQNEVNGWTCLHWACKRNHGQVVSYLLKSGADK
EILTTKGEMPVQLTSRREIRKIMGVEEEDDDDDDDDNLPQLKKESELPFVPNYLANPAFPFIYTPTAEDS
AQMQNGGPSTPPASPPADGSPPLLPPGEPPLLGTFPRDHTSLALVQNGDVSAPSAILRTPESTKPGPVCQ
PPVSQSRSLFSSVPSKPPMSLEPQNGTYAGPAPAFQPFFFTGAFPFNMQELVLKVRIQNPSLRENDFIEI
ELDRQELTYQELLRVCCCELGVNPDQVEKIRKLPNTLLRKDKDVARLQDFQELELVLMISENNFLFRNAA
STLTERPCYNRRASKLTY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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