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Report for CCDS14504.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14504.1 Public Homo sapiens X TCEAL8 24 110 108 CCDS HistoryNCBI Gene:90843Re-query CCDS DB by CCDS ID:14504.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14504.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360000.8 ENSP00000353093.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360000.8Link to Ensembl Protein Viewer:ENSP00000353093.4Re-query CCDS DB by Nucleotide ID:ENST00000360000Re-query CCDS DB by Protein ID:ENSP00000353093
Original member Current member EBI ENST00000372685.8 ENSP00000361770.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372685.8Link to Ensembl Protein Viewer:ENSP00000361770.3Re-query CCDS DB by Nucleotide ID:ENST00000372685Re-query CCDS DB by Protein ID:ENSP00000361770
Original member Current member NCBI NM_001006684.2 NP_001006685.1 Accepted alive Link to Nucleotide Sequence:NM_001006684.2Link to Protein Sequence:NP_001006685.1Re-query CCDS DB by Nucleotide ID:NM_001006684Re-query CCDS DB by Protein ID:NP_001006685Link to BLAST:NP_001006685.1
Original member Current member NCBI NM_153333.3 NP_699164.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153333.3Link to Protein Sequence:NP_699164.1Re-query CCDS DB by Nucleotide ID:NM_153333Re-query CCDS DB by Protein ID:NP_699164Link to BLAST:NP_699164.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001006685.1 117 Q8IYN2 117 100% 0 0
NP_699164.1 117 Q8IYN2 117 100% 0 0

Chromosomal Locations for CCDS 14504.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103253626 103253979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (354 nt):
ATGCAAAAGTCTTGTGAAGAAAATGAGGGAAAACCACAGAACATGCCAAAGGCCGAGGAAGATCGCCCTT
TGGAGGATGTACCACAGGAGGCAGAAGGAAATCCTCAACCTTCCGAAGAAGGCGTAAGCCAGGAAGCAGA
AGGAAACCCCAGAGGAGGGCCGAATCAGCCTGGCCAGGGATTTAAAGAGGACACACCCGTTAGGCATTTG
GACCCTGAAGAAATGATAAGAGGAGTAGATGAGCTTGAAAGGCTTAGGGAAGAGATAAGAAGAGTAAGAA
ACAAGTTTGTGATGATGCATTGGAAGCAAAGACATTCACGCAGCCGTCCTTATCCTGTGTGCTTTAGGCC
TTGA

Translation (117 aa):
MQKSCEENEGKPQNMPKAEEDRPLEDVPQEAEGNPQPSEEGVSQEAEGNPRGGPNQPGQGFKEDTPVRHL
DPEEMIRGVDELERLREEIRRVRNKFVMMHWKQRHSRSRPYPVCFRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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