NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31942.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31942.1 Public Homo sapiens 13 ZMYM5 24 110 108 CCDS HistoryNCBI Gene:9205Re-query CCDS DB by CCDS ID:31942.1Re-query CCDS DB by GeneID:9205See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31942.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382905.8 ENSP00000372361.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382905.8Link to Ensembl Protein Viewer:ENSP00000372361.4Re-query CCDS DB by Nucleotide ID:ENST00000382905Re-query CCDS DB by Protein ID:ENSP00000372361
Original member Current member NCBI NM_001039650.3 NP_001034739.1 Accepted alive Link to Nucleotide Sequence:NM_001039650.3Link to Protein Sequence:NP_001034739.1Re-query CCDS DB by Nucleotide ID:NM_001039650Re-query CCDS DB by Protein ID:NP_001034739Link to BLAST:NP_001034739.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034739.1 382 Q9UJ78-1 382 100% 0 0

Chromosomal Locations for CCDS 31942.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 19837545 19837821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19838700 19838985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19851355 19851448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 19851689 19852180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGGAAAAATGTTCAGTGGGAGGATTAGAGTTGACTGAACAGACTCCTGCTTTATTAGGGAATATGGCCA
TGGCAACTAGTCTCATGGACATAGGGGATTCATTTGGTCATCCAGCTTGTCCTTTAGTCAGTAGATCTAG
GAACTCACCAGTGGAAGATGATGATGATGATGATGATGTTGTGTTTATTGAATCTATACAACCTCCTTCA
ATTTCTGCTCCAGCAATAGCTGATCAAAGAAACTTCATATTTGCATCATCAAAAAATGAAAAGCCTCAAG
GAAATTATTCTGTAATTCCTCCTTCTTCAAGAGATTTGGCATCTCAGAAAGGAAATATAAGTGAGACAAT
TGTTATTGATGATGAAGAGGACATAGAAACAAATGGAGGAGCAGAGAAAAAGTCTTCCTGTTTTATCGAA
TGGGGACTTCCTGGAACTAAAAACAAAACCAACGATTTGGATTTCTCCACTTCCAGTCTTTCAAGAAGTA
AGACCAAGACTGGAGTAAGACCTTTTAACCCTGGTAGAATGAATGTGGCAGGAGACTTATTTCAGAATGG
AGAATTTGCAACTCATCATAGTCCTGATTCTTGGATCTCCCAGTCAGCTTCATTTCCCAGTAATCAGAAA
CAGCCAGGGGTGGATTCTTTATCACCAGTGGCCTTACTTCGTAAGCAGAATTTCCAGCCTACAGCCCAAC
AACAACTTACTAAACCAGCTAAAATCACTTGTGCAAATTGCAAAAAGCCTTTACAGAAGGGACAGACAGC
TTATCAACGAAAAGGATCAGCTCACCTCTTTTGCTCTACCACCTGCCTTTCTTCCTTCTCTCATAAACGT
ACTCAAAACACACGAAGCATAATATGTAAAAAAGATGCATCTACAAAGAAGGCTAATGTCATTCTTCCAG
TAGAATCAAGCAAATCCTTCCAAGAATTTTATAGTACATCTTGTTTGTCTCCCTGTGAAAACAACTGGAA
TCTTAAAAAAGGAGTTTTTAATAAGTCAAGATGTACAATTTGTAGTAAATTAGCAGAGGTCTGGATTTTT
ATACCTAAGTTGTTGTTTAGGCTAACAGTGATAATTTTAACTTTTAAGTGCTATTATGTACTCTTTCATC
TACATAATGCACGTGTTCTGGATGTATAA

Translation (382 aa):
MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDVVFIESIQPPS
ISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVIDDEEDIETNGGAEKKSSCFIE
WGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVAGDLFQNGEFATHHSPDSWISQSASFPSNQK
QPGVDSLSPVALLRKQNFQPTAQQQLTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKR
TQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEVWIF
IPKLLFRLTVIILTFKCYYVLFHLHNARVLDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH