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Report for CCDS30220.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30220.1 Public Mus musculus X Opn1mw 23 108 98 CCDS HistoryNCBI Gene:14539Re-query CCDS DB by CCDS ID:30220.1Re-query CCDS DB by GeneID:14539See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30220.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033771.10 ENSMUSP00000033771.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033771.10Link to Ensembl Protein Viewer:ENSMUSP00000033771.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000033771Re-query CCDS DB by Protein ID:ENSMUSP00000033771
Original member Current member NCBI NM_008106.2 NP_032132.1 Accepted alive Link to Nucleotide Sequence:NM_008106.2Link to Protein Sequence:NP_032132.1Re-query CCDS DB by Nucleotide ID:NM_008106Re-query CCDS DB by Protein ID:NP_032132Link to BLAST:NP_032132.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032132.1 359 O35599 359 100% 0 0

Chromosomal Locations for CCDS 30220.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 74127507 74127603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74132714 74133010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74138419 74138587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74139803 74139968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74143446 74143685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74150546 74150656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGGCCCAAAGGCTTACAGGTGAACAGACACTGGACCACTATGAGGATAGCACCCATGCAAGCATCTTCA
CCTATACCAACAGCAACAGCACCAAAGGTCCCTTTGAAGGCCCCAATTATCACATTGCTCCCAGGTGGGT
GTACCACCTCACCAGCACCTGGATGATTCTTGTGGTCGTTGCATCTGTCTTCACTAATGGACTTGTGCTG
GCAGCCACCATGAGATTCAAGAAGCTGCGCCATCCACTGAACTGGATTCTGGTGAACTTGGCAGTTGCTG
ACCTAGCAGAGACCATTATTGCCAGCACTATCAGTGTTGTGAACCAAATCTATGGCTACTTCGTTCTGGG
ACACCCTCTGTGTGTCATTGAAGGCTACATTGTCTCATTGTGTGGAATCACAGGCCTCTGGTCCCTGGCC
ATCATTTCCTGGGAGAGATGGCTGGTGGTCTGCAAGCCCTTTGGCAATGTGAGATTTGATGCTAAGCTGG
CCACTGTGGGAATCGTCTTCTCCTGGGTCTGGGCTGCTATATGGACGGCCCCACCAATCTTTGGTTGGAG
CAGGTACTGGCCTTATGGCCTGAAGACATCCTGTGGCCCAGACGTGTTCAGCGGTACCTCGTACCCCGGG
GTTCAGTCTTATATGATGGTCCTCATGGTCACGTGCTGCATCTTCCCACTCAGCATCATCGTGCTCTGCT
ACCTCCAAGTGTGGCTGGCCATCCGAGCAGTGGCAAAGCAACAGAAAGAATCTGAGTCCACTCAGAAGGC
CGAGAAGGAGGTGACACGCATGGTGGTGGTGATGGTCTTCGCATACTGCCTCTGCTGGGGACCCTATACT
TTCTTTGCATGCTTTGCTACTGCCCACCCTGGCTATGCCTTCCACCCTCTTGTGGCCTCCCTACCATCCT
ACTTTGCCAAAAGTGCCACTATCTACAACCCCATTATCTATGTCTTTATGAACCGGCAGTTTCGAAACTG
CATCTTACATCTCTTTGGAAAGAAGGTTGATGATAGCTCTGAACTTTCCAGCACCTCCAAGACAGAAGTC
TCATCTGTCTCTTCAGTGTCACCTGCATAA

Translation (359 aa):
MAQRLTGEQTLDHYEDSTHASIFTYTNSNSTKGPFEGPNYHIAPRWVYHLTSTWMILVVVASVFTNGLVL
AATMRFKKLRHPLNWILVNLAVADLAETIIASTISVVNQIYGYFVLGHPLCVIEGYIVSLCGITGLWSLA
IISWERWLVVCKPFGNVRFDAKLATVGIVFSWVWAAIWTAPPIFGWSRYWPYGLKTSCGPDVFSGTSYPG
VQSYMMVLMVTCCIFPLSIIVLCYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMVFAYCLCWGPYT
FFACFATAHPGYAFHPLVASLPSYFAKSATIYNPIIYVFMNRQFRNCILHLFGKKVDDSSELSSTSKTEV
SSVSSVSPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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