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Report for CCDS2070.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2070.1 Public Homo sapiens 2 FHL2 24 110 108 CCDS HistoryNCBI Gene:2274Re-query CCDS DB by CCDS ID:2070.1Re-query CCDS DB by GeneID:2274See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 2070.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322142.13 ENSP00000322909.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000322142.13Link to Ensembl Protein Viewer:ENSP00000322909.8Re-query CCDS DB by Nucleotide ID:ENST00000322142Re-query CCDS DB by Protein ID:ENSP00000322909
Original member Current member EBI ENST00000344213.9 ENSP00000344266.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344213.9Link to Ensembl Protein Viewer:ENSP00000344266.5Re-query CCDS DB by Nucleotide ID:ENST00000344213Re-query CCDS DB by Protein ID:ENSP00000344266
Original member Current member EBI ENST00000393352.7 ENSP00000377020.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393352.7Link to Ensembl Protein Viewer:ENSP00000377020.3Re-query CCDS DB by Nucleotide ID:ENST00000393352Re-query CCDS DB by Protein ID:ENSP00000377020
Original member Current member EBI ENST00000393353.7 ENSP00000377021.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393353.7Link to Ensembl Protein Viewer:ENSP00000377021.3Re-query CCDS DB by Nucleotide ID:ENST00000393353Re-query CCDS DB by Protein ID:ENSP00000377021
Original member Current member EBI ENST00000408995.5 ENSP00000386633.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000408995.5Link to Ensembl Protein Viewer:ENSP00000386633.1Re-query CCDS DB by Nucleotide ID:ENST00000408995Re-query CCDS DB by Protein ID:ENSP00000386633
Original member Current member EBI ENST00000409807.5 ENSP00000386665.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409807.5Link to Ensembl Protein Viewer:ENSP00000386665.1Re-query CCDS DB by Nucleotide ID:ENST00000409807Re-query CCDS DB by Protein ID:ENSP00000386665
Original member Current member EBI ENST00000409177.6 ENSP00000386892.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409177.6Link to Ensembl Protein Viewer:ENSP00000386892.3Re-query CCDS DB by Nucleotide ID:ENST00000409177Re-query CCDS DB by Protein ID:ENSP00000386892
Original member Current member EBI ENST00000530340.6 ENSP00000433567.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000530340.6Link to Ensembl Protein Viewer:ENSP00000433567.2Re-query CCDS DB by Nucleotide ID:ENST00000530340Re-query CCDS DB by Protein ID:ENSP00000433567
Original member Current member NCBI NM_001039492.3 NP_001034581.1 Accepted alive Link to Nucleotide Sequence:NM_001039492.3Link to Protein Sequence:NP_001034581.1Re-query CCDS DB by Nucleotide ID:NM_001039492Re-query CCDS DB by Protein ID:NP_001034581Link to BLAST:NP_001034581.1
Original member Current member NCBI NM_001318894.1 NP_001305823.1 Accepted alive Link to Nucleotide Sequence:NM_001318894.1Link to Protein Sequence:NP_001305823.1Re-query CCDS DB by Nucleotide ID:NM_001318894Re-query CCDS DB by Protein ID:NP_001305823Link to BLAST:NP_001305823.1
Original member Current member NCBI NM_001318895.3 NP_001305824.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001318895.3Link to Protein Sequence:NP_001305824.1Re-query CCDS DB by Nucleotide ID:NM_001318895Re-query CCDS DB by Protein ID:NP_001305824Link to BLAST:NP_001305824.1
Original member Current member NCBI NM_001318896.2 NP_001305825.1 Accepted alive Link to Nucleotide Sequence:NM_001318896.2Link to Protein Sequence:NP_001305825.1Re-query CCDS DB by Nucleotide ID:NM_001318896Re-query CCDS DB by Protein ID:NP_001305825Link to BLAST:NP_001305825.1
Original member Current member NCBI NM_001374399.1 NP_001361328.1 Accepted alive Link to Nucleotide Sequence:NM_001374399.1Link to Protein Sequence:NP_001361328.1Re-query CCDS DB by Nucleotide ID:NM_001374399Re-query CCDS DB by Protein ID:NP_001361328Link to BLAST:NP_001361328.1
Original member Current member NCBI NM_001450.4 NP_001441.4 Accepted alive Link to Nucleotide Sequence:NM_001450.4Link to Protein Sequence:NP_001441.4Re-query CCDS DB by Nucleotide ID:NM_001450Re-query CCDS DB by Protein ID:NP_001441Link to BLAST:NP_001441.4
Original member Current member NCBI NM_201555.3 NP_963849.1 Accepted alive Link to Nucleotide Sequence:NM_201555.3Link to Protein Sequence:NP_963849.1Re-query CCDS DB by Nucleotide ID:NM_201555Re-query CCDS DB by Protein ID:NP_963849Link to BLAST:NP_963849.1
Original member Current member NCBI NM_201557.5 NP_963851.2 Accepted alive Link to Nucleotide Sequence:NM_201557.5Link to Protein Sequence:NP_963851.2Re-query CCDS DB by Nucleotide ID:NM_201557Re-query CCDS DB by Protein ID:NP_963851Link to BLAST:NP_963851.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034581.1 279 Q14192-1 279 100% 0 0
NP_001305823.1 279 Q14192-1 279 100% 0 0
NP_001305824.1 279 Q14192-1 279 100% 0 0
NP_001305825.1 279 Q14192-1 279 100% 0 0
NP_001361328.1 279 Q14192-1 279 100% 0 0
NP_001441.4 279 Q14192-1 279 100% 0 0
NP_963849.1 279 Q14192-1 279 100% 0 0
NP_963851.2 279 Q14192-1 279 100% 0 0

Chromosomal Locations for CCDS 2070.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 105361283 105361434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105363285 105363471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105367570 105367739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105373559 105373733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105386361 105386516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGACTGAGCGCTTTGACTGCCACCATTGCAACGAATCTCTCTTTGGCAAGAAGTACATCCTGCGGGAGG
AGAGCCCCTACTGCGTGGTGTGCTTTGAGACCCTGTTCGCCAACACCTGCGAGGAGTGTGGGAAGCCCAT
CGGCTGTGACTGCAAGGACTTGTCTTACAAGGACCGGCACTGGCATGAAGCCTGTTTCCACTGCTCGCAG
TGCAGAAACTCACTGGTGGACAAGCCCTTTGCTGCCAAGGAGGACCAGCTGCTCTGTACAGACTGCTATT
CCAACGAGTACTCATCCAAGTGCCAGGAATGCAAGAAGACCATCATGCCAGGTACCCGCAAGATGGAGTA
CAAGGGCAGCAGCTGGCATGAGACCTGCTTCATCTGCCACCGCTGCCAGCAGCCAATTGGAACCAAGAGT
TTCATCCCCAAAGACAATCAGAATTTCTGTGTGCCCTGCTATGAGAAACAACATGCCATGCAGTGCGTTC
AGTGCAAAAAGCCCATCACCACGGGAGGGGTCACTTACCGGGAGCAGCCCTGGCACAAGGAGTGCTTCGT
GTGCACCGCCTGCAGGAAGCAGCTGTCTGGGCAGCGCTTCACAGCTCGCGATGACTTTGCCTACTGCCTG
AACTGCTTCTGTGACTTGTATGCCAAGAAGTGTGCTGGGTGCACCAACCCCATCAGCGGACTTGGTGGCA
CAAAATACATCTCCTTTGAGGAACGGCAGTGGCATAACGACTGCTTTAACTGTAAGAAGTGCTCCCTCTC
ACTGGTGGGGCGTGGCTTCCTCACAGAGAGGGACGACATCCTGTGCCCCGACTGTGGGAAAGACATCTGA

Translation (279 aa):
MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRHWHEACFHCSQ
CRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKS
FIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTARDDFAYCL
NCFCDLYAKKCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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