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Report for CCDS27386.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27386.1 Public Mus musculus 15 Npr3 23 108 98 CCDS HistoryNCBI Gene:18162Re-query CCDS DB by CCDS ID:27386.1Re-query CCDS DB by GeneID:18162See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27386.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066529.4 ENSMUSP00000066737.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066529.4Link to Ensembl Protein Viewer:ENSMUSP00000066737.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000066529Re-query CCDS DB by Protein ID:ENSMUSP00000066737
Original member NCBI NM_008728.2 NP_032754.2 Updated not alive Link to Nucleotide Sequence:NM_008728.2Link to Protein Sequence:NP_032754.2Re-query CCDS DB by Nucleotide ID:NM_008728Re-query CCDS DB by Protein ID:NP_032754
Current member NCBI NM_008728.3 NP_032754.2 Accepted alive Link to Nucleotide Sequence:NM_008728.3Link to Protein Sequence:NP_032754.2Re-query CCDS DB by Nucleotide ID:NM_008728Re-query CCDS DB by Protein ID:NP_032754Link to BLAST:NP_032754.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032754.2 536 P70180 536 100% 0 0

Chromosomal Locations for CCDS 27386.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 11845177 11845288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11846298 11846385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11848469 11848604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11851428 11851522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11858617 11858752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11883298 11883464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11895682 11895804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11904886 11905639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1611 nt):
ATGCGGTCCTTGCTGCTGTTCACTTTCTCGGCGTGCGTGCTGCTGGCCCGGGTGCTGCTGGCTGGCGGCG
CGAGCAGCGGCGCCGGGGACACCCGGCCAGGCAGCAGGCGCCGGGCGAGAGAGGCGCTGGCGGCTCAAAA
GATCGAGGTGCTTGTTCTATTGCCCCGGGACGATTCGTACTTGTTCTCGCTGGCCCGGGTGAGGCCGGCC
ATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCGCT
TCCAGGTGGCCTACGAAGACTCGGACTGCGGCAACCGCGCGCTCTTCAGTCTTGTGGACCGCGTGGCGGC
GGCGCGCGGCGCCAAGCCGGATCTCATCCTGGGGCCCGTGTGCGAGTACGCGGCGGCGCCGGTGGCTCGG
CTGGCGTCTCACTGGGACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACA
CGGAATACTCGCACCTCACGCGCGTGGCGCCTGCCTACGCCAAGATGGGAGAGATGATGCTCGCTCTGTT
TCGCCACCACCACTGGAGCCGTGCAGCCCTGGTCTACAGCGACGACAAACTCGAGAGGAACTGTTATTTC
ACCCTCGAGGGGGTCCACGAGGTTTTTCAGGAGGAGGGGTTGCACACGTCTGCCTACAATTTCGACGAGA
CCAAAGACTTGGACCTGGACGACATAGTGCGCTACATCCAAGGCAGCGAGCGAGTGGTGATCATGTGTGC
CAGTGGTGACACCATTCGGAGAATCATGTTGGCGGTGCACAGACACGGCATGACCAGTGGAGACTACGCT
TTCTTCAACATTGAACTCTTCAACAGTTCTTCCTACGGAGATGGCTCGTGGAGGAGAGGAGACAAACACG
ACTCTGAAGCTAAACAAGCATACTCGTCCCTCCAAACAGTCACCCTACTGAGGACCGTGAAACCTGAGTT
TGAGAAGTTTTCCATGGAGGTGAAAAGTTCTGTTGAGAAACAAGGGCTCAATGAGGAGGATTACGTGAAC
ATGTTTGTTGAAGGGTTCCATGACGCCATCCTCCTCTACGTTCTGGCTTTACATGAAGTACTCAGAGCTG
GCTACAGCAAGAAGGATGGGGGGAAAATCATCCAGCAGACTTGGAACAGGACATTTGAAGGTATCGCCGG
GCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGACTTCTCTGTGGTTGCCATGACTGACACTGAA
GCAGGCACCCAAGAGGTCATTGGTGATTACTTTGGGAAAGAAGGCCGGTTCCAAATGCGATCGAATGTCA
AATATCCTTGGGGCCCTTTGAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCC
TTGCAAATCATCAGGTGGCCTAGAAGAATCTGCAGTGACAGGAATCGTTGTGGGGGCCCTACTAGGTGCT
GGCTTGCTAATGGCCTTCTACTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAAATCAGCAAG
AGGAAAGCAACATCGGGAAGCATCGAGAGCTGCGAGAAGATTCCATCAGATCACATTTTTCGGTGGCTTA
A

Translation (536 aa):
MRSLLLFTFSACVLLARVLLAGGASSGAGDTRPGSRRRAREALAAQKIEVLVLLPRDDSYLFSLARVRPA
IEYALRSVEGNGTGRKLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARGAKPDLILGPVCEYAAAPVAR
LASHWDLPMLSAGALAAGFQHKDTEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYF
TLEGVHEVFQEEGLHTSAYNFDETKDLDLDDIVRYIQGSERVVIMCASGDTIRRIMLAVHRHGMTSGDYA
FFNIELFNSSSYGDGSWRRGDKHDSEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNEEDYVN
MFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVVAMTDTE
AGTQEVIGDYFGKEGRFQMRSNVKYPWGPLKLRLDETRIVEHTNSSPCKSSGGLEESAVTGIVVGALLGA
GLLMAFYFFRKKYRITIERRNQQEESNIGKHRELREDSIRSHFSVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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