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Report for CCDS23327.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23327.1 Public Mus musculus 9 Myzap 23 108 98 CCDS HistoryNCBI Gene:102371Re-query CCDS DB by CCDS ID:23327.1Re-query CCDS DB by GeneID:102371See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23327.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000093823.7 ENSMUSP00000091342.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093823.7Link to Ensembl Protein Viewer:ENSMUSP00000091342.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000093823Re-query CCDS DB by Protein ID:ENSMUSP00000091342
Original member Current member NCBI NM_001033208.4 NP_001028380.1 Accepted alive Link to Nucleotide Sequence:NM_001033208.4Link to Protein Sequence:NP_001028380.1Re-query CCDS DB by Nucleotide ID:NM_001033208Re-query CCDS DB by Protein ID:NP_001028380Link to BLAST:NP_001028380.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028380.1 466 Q3UIJ9 466 100% 0 0

Chromosomal Locations for CCDS 23327.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 71505133 71505229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71515069 71515169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71524782 71524865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71546669 71546774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71548724 71548803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71550179 71550307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71552239 71552364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71555585 71555737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71558848 71558961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71560955 71561047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71564410 71564565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71579611 71579697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71592190 71592264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1401 nt):
ATGCTGCGCTCCACGTCCACTGTCACCCTGTTCTCAGGTGGCGGCGCCAAGTCGCCTGGAACGCCCAGTA
GAAGGGCAAATGTCTGCAGACTGCGGCTGACTGTGCCCCCTGAGAATCCAGTGCCACAGCAAACAGAAAA
GAAGATCGAAAGGAAAGATCAGCCTCCAGAACTAAGCAATGGAGAATCTACCAAGAGGCTCCCTCAGGGT
GTTGTCTATGGTGTGGTGCGAAGATCAGATCCCAACCAGCAGAAGGAAATGGTCGTGTATGGCTGGTCCA
CCAATCAGCTGAAAGAAGAGATGAATTACATCAAAGACGTGAGGGCCACACTGGAGAAAGTGAGGAAGCG
GATGTATGGAGACTATGATGAGATGAGACAGAAGATCCGACAGCTCACCCAGGACCTGTCGGTGTCCCAT
GCTCAGCAGGACTATCTAGACAGTCACATCCAAGCCCAGGCATCGGCCCTGGATAGCTTCAATGCCATGA
ATGCGGCATTGGCATCAGACTCTGTTGGCTTACAGAAAACCCTTGTGGACGTGACTTTGGAAAATAGCCA
TATCAAGGATCAAATCCGACATCTGCAACAGACCTATGAAGCATCCATGGACAAGCTGCGGGAGAAGCAG
AGGCAGTTAGAGGCTGCTCAGATGGAAAACCAGCTCCTAAAGATGAGGGTGGAGTCATCGCAAGAAGCCA
ATGCTGAGGTGATGCGGGAGATGACGAGAAAGCTGTACAGCCAGTATGAGGAGAAACTGCAGGAGGCACA
GCGCAAGCACAGTGCGGAGAAGGAGGTGCTCCTGGAAGAAACCAATAGCTTTCTGAAGGCCATCGAAGAG
GCCAATAAGAAGATGGAGGCAGCTGAGCTCAGCCTGGAGGAGAAAGACCAGAAGATCGGGGAACTGGACA
GGCTGATTGAACGCATGGAGAAGGAACGGCATCAGCTCCAGCTCCAGCTCCTTGAGCATGAGACAGAAAT
GTCAGGGGAGATGGCAGATTCTGACAAGAACAGGTACCAGCAGCTGGAGGAGGCGTCGGCCAGCCTCCGG
GAGCGGATCAGACACCTGGATGACATGGTGCACTGCCAGCAGAAGAAAGTCAAGCAGATGGTTGAGGAGA
TTGAGTCATTAAAGAAAAAAGTGCAACAGAAGCAGCTCCTGATACTGCAGCTTTTAGAAAAAATCTCTTT
CCTGGAAGGAGAGAATAATGAACTACAAAGCAGGTTGGACTATTTGACAGAAACCCAGCCCAAGACTGAA
GTGGAAACAAGAGAAATTGGAGTGGGGTGTGATCTTCTTCCCAGCCCAACAGGCAGGACTCGTGAAATCA
CAATGCCTTCCAGGAGTTACACCCCGTACACGAGAGTCCTGGAGTTATCCTCAAAGAAAACGCTGACTTA
G

Translation (466 aa):
MLRSTSTVTLFSGGGAKSPGTPSRRANVCRLRLTVPPENPVPQQTEKKIERKDQPPELSNGESTKRLPQG
VVYGVVRRSDPNQQKEMVVYGWSTNQLKEEMNYIKDVRATLEKVRKRMYGDYDEMRQKIRQLTQDLSVSH
AQQDYLDSHIQAQASALDSFNAMNAALASDSVGLQKTLVDVTLENSHIKDQIRHLQQTYEASMDKLREKQ
RQLEAAQMENQLLKMRVESSQEANAEVMREMTRKLYSQYEEKLQEAQRKHSAEKEVLLEETNSFLKAIEE
ANKKMEAAELSLEEKDQKIGELDRLIERMEKERHQLQLQLLEHETEMSGEMADSDKNRYQQLEEASASLR
ERIRHLDDMVHCQQKKVKQMVEEIESLKKKVQQKQLLILQLLEKISFLEGENNELQSRLDYLTETQPKTE
VETREIGVGCDLLPSPTGRTREITMPSRSYTPYTRVLELSSKKTLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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