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Report for CCDS20595.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20595.1 Public Mus musculus 6 Klrh1 23 108 98 CCDS HistoryNCBI Gene:232415Re-query CCDS DB by CCDS ID:20595.1Re-query CCDS DB by GeneID:232415See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20595.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095409.2 ENSMUSP00000093058.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095409.2Link to Ensembl Protein Viewer:ENSMUSP00000093058.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000095409Re-query CCDS DB by Protein ID:ENSMUSP00000093058
Original member Current member NCBI NM_001014997.2 NP_001014997.1 Accepted alive Link to Nucleotide Sequence:NM_001014997.2Link to Protein Sequence:NP_001014997.1Re-query CCDS DB by Nucleotide ID:NM_001014997Re-query CCDS DB by Protein ID:NP_001014997Link to BLAST:NP_001014997.1

Chromosomal Locations for CCDS 20595.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 129766648 129766780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129768093 129768199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129771621 129771772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129772351 129772461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129775382 129775465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129775756 129775840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGAATGACGAAAGACCAACATATGCACAGCTGAAATTATCCAAGAAGAGTAAGGACAAAAAACAGTCCA
CTCAGAAAAAGAAAGAATATCCATGGCGCATAAGTGTTGTGATCCTGGGAACAGTATGTCTTTGTCTTCT
GATATCAAGCACAGTCTTTGGATATTGGTTTTTTCAGGCTACTTCAAACTTCAAAATTCAATATGAGAAA
GATAAAAATGAAAGTGCTGTCTCCTCAATGGAAGTAGTACATTCTTCAGGTTTACTACTTACTGCTGCAC
GAAAAGGCTGCTATACATGTCAAGGAGGGTGGTCTTGCTGTGGAGGAAAGTGTTACTTCTTTTCAGAAGA
AGAAAAGACATGGGATGAGAGTGAGGCATCCTGCAAAGTCCTGGGTTCTCTTCTCGCTAAGATTGACAGC
AGAGAGGAGCAGAACTTTATTCAGTCACAAGTGAATTACAGCTATTGGGTTGGATTACATAAAAAAGGAA
GTCAGTTCCAGTGGGTACACCATAAGGATGCAAAACTTTCTTCAGATTTGGATTTTCACACAGCAACACA
TGTAGCAGATGCAGAATGTGGATATATCAAGCCAAAAAATCTCAACGTTGCTCCATGTCATAGATATTTC
TACTACATTTGTAAAAGGAATTTTACCTGCCCAATGACTTAA

Translation (223 aa):
MNDERPTYAQLKLSKKSKDKKQSTQKKKEYPWRISVVILGTVCLCLLISSTVFGYWFFQATSNFKIQYEK
DKNESAVSSMEVVHSSGLLLTAARKGCYTCQGGWSCCGGKCYFFSEEEKTWDESEASCKVLGSLLAKIDS
REEQNFIQSQVNYSYWVGLHKKGSQFQWVHHKDAKLSSDLDFHTATHVADAECGYIKPKNLNVAPCHRYF
YYICKRNFTCPMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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