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Report for CCDS46665.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46665.1 Public Homo sapiens 22 RIMBP3 24 110 108 CCDS HistoryNCBI Gene:85376Re-query CCDS DB by CCDS ID:46665.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46665.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619918.1 ENSP00000483386.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000619918.1Link to Ensembl Protein Viewer:ENSP00000483386.1Re-query CCDS DB by Nucleotide ID:ENST00000619918Re-query CCDS DB by Protein ID:ENSP00000483386
Original member Current member NCBI NM_015672.2 NP_056487.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015672.2Link to Protein Sequence:NP_056487.1Re-query CCDS DB by Nucleotide ID:NM_015672Re-query CCDS DB by Protein ID:NP_056487Link to BLAST:NP_056487.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056487.1 1639 Q9UFD9 1639 100% 0 0

Chromosomal Locations for CCDS 46665.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 18606515 18611434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4920 nt):
ATGGCCAAGGACTCGCCCAGCCCCTTGGGCGCGTCGCCCAAGAAGCCGGGCTGCTCCAGCCCGGCGGCGG
CAGTGCTGGAGAACCAGAGGCGGGAGCTGGAGAAGCTACGGGCGGAGCTGGAGGCGGAGCGGGCAGGCTG
GCGGGCGGAACGGCGGCGCTTCGCTGCCCGGGAGCGCCAGCTGCGTGAGGAGGCCGAGCGGGAGCGGCGA
CAGCTGGCTGACCGTCTGCGCTCCAAGTGGGAGGCACAGCGCAGCCGGGAGTTGCGGCAGCTGCAAGAGG
AGATGCAGCGGGAACGCGAGGCCGAGATCCGGCAGCTGCTGCGCTGGAAGGAGGCCGAGCAGCGGCAGCT
GCAGCAGCTGCTGCACCGGGAGCGCGATGGCGTGGTGCGCCAAGCCCGGGAGCTGCAGCGCCAGCTGGCC
GAGGAGCTGGTGAACCGCGGCCACTGTAGCCGCCCGGGGGCGTCCGAGGTTTCCGCGGCGCAGTGCCGCT
GTCGCCTGCAGGAAGTGTTGGCGCAGCTTCGCTGGCAGACTGACGGCGAGCAGGCGGCGCGCATCCGCTA
TCTGCAGGCGGCGCTGGAGGTGGAGCGCCAGCTCTTCCTCAAGTACATCCTGGCGCACTTCCGCGGGCAC
CCGGCTTTGTCGGGATCACCGGACCCCCAAGCTGTGCATTCCTTGGAAGAACCGCTGCCCCAGACCTCCA
GCGGCTCTTGCCACGCCCCCAAACCCGCCTGCCAACTCGGATCTCTAGACAGCCTGAGTGCTGAAGTCGG
TGTGCGCTCCCGCTCGCTAGGCCTGGTGTCCTCTGCGTGCTCCAGCTCCCCAGACGGCCTGCTCTCCACG
CACGCCAGCTCCCTTGATTGCTTCGCACCTGCGTGTTCCCGCTCGCTTGACAGCACCCGGAGCCTCCCCA
AGGCCTCCAAATCCGAGGAGCGGCCCTCCTCACCAGACACCTCCACCCCTGGCTCCCGGAGGCTCTCGCC
GCCACCATCGCCACTCCCGCCGCCACCACCACCGTCAGCCCACAGGAAACTCAGCAACCCGCGGGGAGGA
GAAGGCTCTGAGAGCCAGCCCTGCGAAGTCCTGACTCCCTCACCCCCGGGCCTGGGCCACCACGAGCTGA
TAAAGCTGAACTGGCTGCTGGCCAAGGCGTTGTGGGTGCTGGCGCGCCGCTGTTATACCCTGCAAGCGGA
GAACAAGCAGCTGCGGCGTGCAGGCTGCCCCTACCAGGCAGACGAGAAGGTGAAGCGGCTCAAGGTAAAG
CGCGCGGAGCTGACCGGGCTCGCGCGGCGCCTAGCTGACCGCGCCCGCAAGCTGCAGGAGACCAACCTCC
GGGCCGTGAGCGCGCCTATACCCGGCGAGAGTTGCGCCGGCCTGGAGCTGTGCCAAGTCTTTGCCCGCCA
GCGCGCTCGGGACCTGTCGGAGCAGGCGAGCGCGCCGCTGGCCAAGGACAAGCAGATCGAAGAGCTGCGG
CAGGAGTGCCACCTCCTGCAGGCGCGTGTCGCCTCGGGTCCCTGCAGCGACCTGCATACTGGAAGGGGCG
GCCCCTGCACCCAGTGGCTCAACGTCAGAGACTTAGACCGCCTGCAGCGCGAGTCCCAGCGGGAAGTGCT
GCGCCTGCAGAGGCAGTTGATGCTTCAGCAGGGCAACGGTGGCGCTTGGCCCGAGGCGGGCGGCCAGAGC
GCAACCTGCGAGGAGGTGCGACGGCAGATGCTGGCGCTGGAGCGCGAGCTGGACCAGCGGCGGCGCGAGT
GCCAGGAGCTGGGCGCGCAGGCGGCCCCGGCGCGGCGACGTGGCGAGGAGGCCGAGACACAGCTGCAGGC
GGCGCTGCTCAAAAACGCCTGGCTGGCGGAGGAGAATGGGCGGCTGCAGGCCAAGACCGACTGGGTGCGG
AAGGTGGAGGCTGAGAATAGCGAAGTGCGCGGCCACCTGGGCCGCGCGTGTCAAGAGCGCGATGCCTCCG
GCTTGATCGCCGAACAGCTGCTGCAGCAGGCGGCGCGCGGGCAGGACAGGCAGCAGCAGCTGCAACGCGA
CCCGCAGAAGGCCCTGTGTGACCTCCATCCTTCCTGGAAGGAGATACAGGCGCTCCAGTGTCGGCCTGGT
CACCCTCCTGAACAGCCCTGGGAGACCAGTCAAATGCCGGAGTCCCAAGTTAAAGGTAGCAGAAGGCCCA
AGTTCCACGCACGGCCTGAAGACTACGCAGTGTCACAGCCCAACAGAGACATACAGGAGAAAAGGGAAGC
CTCCCTCGAGGAGAGCCCAGTTGCCCTTGGGGAGTCAGCCAGTGTCCCCCAAGTTTCAGAGACAGTCCCT
GCCAGCCAACCTCTGTCCAAGAAAACCAGCTCCCAGTCAAACTCCTCCTCTGAGGGGTCGATGTGGGCCA
CCGTGCCGTCCTCCCCTACTCTGGACAGGGACACAGCCAGTGAGGTGGATGACCTGGAGCCTGACAGCGT
GTCCCTGGCCCTGGAAATGGGGGGCTCGGCGGCTCCTGCTGCCCCCAAGCTCAAGATCTTCATGGCTCAG
TATAACTACAACCCATTTGAGGGGCCCAATGATCACCCTGAGGGTGAGCTGCCCCTCACAGCTGGGGACT
ACATATATATCTTCGGGGACATGGATGAGGATGGCTTCTATGAGGGGGAGCTTGAGGATGGCCGGCGGGG
GCTGGTGCCCTCCAACTTCGTGGAGCAGATTCCGGACAGCTACATCCCAGGCTGCCTGCCTGCCAAATCC
CCTGATCTTGGCCCCAGTCAACTCCCAGCGGGGCAGGATGAAGCTCTGGAGGAAGACAGCTTATTATCTG
GGAAAGCCCAGGGAGTGGTGGACAGAGGGCTGTGCCAGATGGTCAGGGTGGGCTCCAAGACAGAAGTAGC
AACAGAGATCCTGGATACCAAGACGGAAGCCTGCCAGCTGGGCTTGCTGCAGAGCATGGGGAAGCAGGGC
CTCTCCAGACCCCTTCTGGGGACCAAAGGGGTGCTCCGTATGGCTCCCATGCAGCTACACCTGCAGAATG
TCACAGCCACATCAGCCAACATCACCTGGGTCTACAGCAGCCACCGCCACCCCCATGTGGTATATCTTGA
TGACCGAGAGCATGCCCTGACCCCAGCGGGCGTGAGCTGCTACACCTTCCAGGGCCTGTGCCCCGGCACG
CACTACCGGGCGCGGGTGGAGGTGCGGCTGCCACGGGACTTGCTGCAGGTGTATTGGGGAACTATGTCCT
CCACCGTCACCTTCGACACACTCTTGGCAGGACCTCCCTACCCACCGCTGGATGTGCTGGTGGAGCGCCA
TGCCTCGCCAGGTGTCCTGGTGGTCAGCTGGCTCCCTGTGACCATTGACTCAGCTGGGTCCTCCAATGGA
GTCCAGGTCACCGGTTATGCTGTGTATGCAGATGGGCTTAAGGTTTGTGAGGTCGCCGATGCCACTGCTG
GGAGCACCCTATTGGAATTCTCCCAGCTACAGGTGCCCCTCACGTGGCAGAAGGTCTCAGTGAGAACCAT
GTCACTCTGTGGTGAGTCCCTGGATTCAGTGCCTGCTCAGATCCCCGAGGACTTCTTCATGTGTCACCGA
TGGCCAGAGACTCCACCCTTTAGCTACACTTGTGGCGACCCATCCACCTACAGAGTCACCTTCCCCGTCT
GCCCCCAGAAGCTGTCACTGGCTCCTCCGAGTGCCAAGGCCAGCCCCCACAACCCTGGAAGCTGCGGGGA
GCCCCAGGCCAAGTTCCTAGAAGCATTCTTTGAAGAACCCCCAAGGAGGCAATCCCCAGTGTCCAACCTG
GGCTCAGAAGGAGAATGTCCGAGTTCAGGGGCTGGCAGCCAAGCCCAGGAGCTTGCAGAGGCCTGGGAGG
GCTGTAGAAAGGACCTGCTCTTTCAGAAGAGTCCCCAGAACCACAGGCCACCTTCAGTCAGTGACCAGCC
TGGGGAGAAGGAAAATTGCTCCCAGCACATGGGCACCAGCAAAAGCCCTGCTCCAGGATTCATCCATCTA
CGCACCGAGTGTGGGCCCAGGAAAGAACCGTGTCAGGAAAAGGCTGCCCTTGAGAGGGTACTTCGGCAAA
AGCAAGATGCCCAAGGGTTCACACCTCCCCAGCTGGGCGCCAGCCAACAGTATGCATCTGACTTCCATAA
CGTTTTGAAGGAGGAGCAGGAGGCACTGTGCTTGGATCTGTGGGGCACAGAGAGGCGAGAGGAGAGGAGG
GAGCCTGAGCCCCACAGCAGGCAAGGACAAGCTCTGGGGGTGAAGAGAGGGTGCCAGCTCCATGAGCCCA
GCTCGGCACTGTGTCCAGCTCCATCCGCCAAAGTCATCAAGATGCCCAGGGGTGGCCCCCAACAGCTGGG
GACGGGGGCCAACACTCCAGCCAGGGTCTTTGTGGCCCTCTCTGATTACAACCCCCTGGTGATGTCTGCC
AACCTCAAGGCTGCAGAGGAGGAGCTGGTCTTCCAGAAAAGGCAGTTGCTAAGAGTGTGGGGCTCTCAGG
ACACCCATGATTTCTACCTCAGCGAGTGCAACAGGCAAGTGGGCAATATCCCCGGGCGCCTAGTGGCTGA
GATGGAGGTGGGGACAGAGCAGACTGATAGGAGGTGGCGTTCTCCGGCCCAAGGGAACCTGCCTTCTGTG
GCCCACCTCGAGGACTTTCAGGGGCTCACCATCCCCCAGGGTTCCTCCCTGGTGCTCCAGGGGAACTCCA
AGAGACTCCCACTGTGGACTCCAAAGATCATGATAGCAGCTCTGGACTATGATCCTGGGGATGGGCAAAT
GGGGGGCCAGGGGAAGGGCAGGCTGGCGCTGAGGGCAGGAGACGTGGTCATGGTTTACGGGCCCATGGAT
GACCAAGGATTCTATTATGGAGAGTTGGGCGGCCACAGGGGCCTGGTTCCTGCCCACCTGCTGGATCACA
TGTCCCTCCATGGACACTGA

Translation (1639 aa):
MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERR
QLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLA
EELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGH
PALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLST
HASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGG
EGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQAENKQLRRAGCPYQADEKVKRLKVK
RAELTGLARRLADRARKLQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELR
QECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQS
ATCEEVRRQMLALERELDQRRRECQELGAQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVR
KVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPG
HPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVP
ASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQ
YNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELEDGRRGLVPSNFVEQIPDSYIPGCLPAKS
PDLGPSQLPAGQDEALEEDSLLSGKAQGVVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQG
LSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGT
HYRARVEVRLPRDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNG
VQVTGYAVYADGLKVCEVADATAGSTLLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHR
WPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNL
GSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCSQHMGTSKSPAPGFIHL
RTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLWGTERREERR
EPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSA
NLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGNLPSV
AHLEDFQGLTIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMD
DQGFYYGELGGHRGLVPAHLLDHMSLHGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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