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Report for CCDS1592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1592.1 Public Homo sapiens 1 GNPAT 24 110 108 CCDS HistoryNCBI Gene:8443Re-query CCDS DB by CCDS ID:1592.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1592.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366647.9 ENSP00000355607.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366647.9Link to Ensembl Protein Viewer:ENSP00000355607.4Re-query CCDS DB by Nucleotide ID:ENST00000366647Re-query CCDS DB by Protein ID:ENSP00000355607
Original member Current member NCBI NM_014236.4 NP_055051.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014236.4Link to Protein Sequence:NP_055051.1Re-query CCDS DB by Nucleotide ID:NM_014236Re-query CCDS DB by Protein ID:NP_055051Link to BLAST:NP_055051.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055051.1 680 O15228-1 680 100% 0 0

Chromosomal Locations for CCDS 1592.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 231241379 231241456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231250961 231251143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231260507 231260683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231262723 231262852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231265293 231265420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231265712 231265787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231266014 231266165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231266277 231266407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231267680 231267903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231270758 231271000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231272312 231272391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231273922 231274062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231275221 231275320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231275405 231275498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231276135 231276196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231277499 231277542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2043 nt):
ATGGAGTCTTCCAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCC
TCTACTCGAAGGAGCTCAAAAAGTGGGATGAGTTTGAAGATATTTTAGAAGAGAGGAGGCATGTCAGTGA
CTTGAAATTTGCAATGAAATGCTACACACCTCTTGTCTATAAGGGAATTACTCCATGTAAACCAATTGAT
ATTAAATGTAGTGTTCTCAATTCTGAGGAGATTCATTATGTCATTAAACAGCTTTCCAAGGAATCCCTTC
AATCTGTGGATGTCCTCCGAGAGGAAGTGAGTGAGATCTTAGATGAAATGAGTCACAAACTGCGTCTTGG
AGCCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTATTTAAACAAATTTTCTCGAAGGTGTGTGTAAAT
GAAGAAGGTATTCAGAAACTACAAAGAGCCATCCAGGAGCATCCTGTTGTTCTGCTGCCTAGTCATCGAA
GTTACATTGACTTCCTCATGTTGTCTTTTCTTCTATACAATTATGATTTGCCTGTGCCAGTTATAGCAGC
AGGAATGGACTTCCTGGGAATGAAAATGGTTGGTGAGCTGCTACGAATGTCGGGTGCCTTTTTCATGCGG
CGTACCTTTGGTGGCAATAAACTCTACTGGGCTGTATTCTCTGAATATGTAAAAACTATGTTACGGAATG
GTTATGCTCCTGTTGAATTTTTCCTCGAAGGGACAAGAAGCCGCTCTGCCAAGACATTGACTCCTAAATT
TGGTCTTCTGAATATTGTGATGGAGCCATTTTTTAAAAGAGAAGTTTTTGATACCTACCTTGTCCCAATT
AGTATCAGTTATGATAAGATCTTGGAAGAAACTCTTTATGTGTATGAGCTTCTAGGGGTTCCTAAACCAA
AAGAGTCTACAACTGGGTTGCTGAAAGCCAGAAAGATTCTCTCTGAAAATTTTGGAAGCATCCATGTGTA
CTTTGGAGATCCTGTGTCACTTCGATCTTTGGCAGCTGGGAGGATGAGTCGGAGCTCATATAACTTGGTT
CCAAGATACATTCCTCAGAAACAGTCTGAGGACATGCATGCCTTTGTCACTGAAGTTGCCTACAAAATGG
AGCTTCTGCAAATTGAAAACATGGTTTTGAGCCCCTGGACCCTAATAGTTGCTGTTCTGCTTCAGAACCG
GCCATCCATGGACTTTGATGCTCTGGTGGAAAAGACTTTATGGCTAAAAGGCTTAACCCAGGCATTTGGA
GGGTTTCTCATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTCCA
ACATTGCCAGCCTTGTCAAAGACCAGGTGATTCTGAAAGTGGACTCCGGAGACTCGGAAGTGGTCGATGG
GCTTATGCTCCAGCACATCACTCTCCTCATGTGCTCAGCTTATAGGAACCAGCTGCTCAACATTTTTGTG
CGCCCATCCTTAGTAGCAGTAGCATTGCAGATGACACCAGGGTTCAGGAAAGAGGATGTCTACAGTTGCT
TTCGCTTCCTACGTGATGTTTTTGCAGATGAGTTCATCTTCCTTCCAGGAAACACACTAAAGGACTTTGA
AGAAGGCTGTTACCTGCTTTGTAAAAGTGAAGCCATACAAGTGACTACGAAAGACATCCTAGTTACAGAG
AAAGGAAATACTGTGTTAGAATTTTTAGTAGGACTCTTTAAACCTTTTGTGGAAAGCTATCAGATAATTT
GCAAGTACCTTTTGAGTGAAGAAGAGGACCACTTCAGTGAGGAACAGTACTTGGCTGCAGTCAGAAAATT
CACAAGTCAGCTTCTCGATCAAGGTACCTCTCAATGTTATGATGTATTATCTTCTGATGTGCAGAAAAAC
GCCTTAGCAGCCTGTGTGAGGCTCGGAGTAGTGGAGAAGAAGAAGATAAATAATAACTGTATATTTAATG
TGAATGAACCTGCCACAACCAAATTAGAAGAAATGCTTGGTTGTAAGACACCAATAGGAAAACCAGCCAC
TGCAAAACTTTAA

Translation (680 aa):
MESSSSSNSYFSVGPTSPSAVVLLYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPID
IKCSVLNSEEIHYVIKQLSKESLQSVDVLREEVSEILDEMSHKLRLGAIRFCAFTLSKVFKQIFSKVCVN
EEGIQKLQRAIQEHPVVLLPSHRSYIDFLMLSFLLYNYDLPVPVIAAGMDFLGMKMVGELLRMSGAFFMR
RTFGGNKLYWAVFSEYVKTMLRNGYAPVEFFLEGTRSRSAKTLTPKFGLLNIVMEPFFKREVFDTYLVPI
SISYDKILEETLYVYELLGVPKPKESTTGLLKARKILSENFGSIHVYFGDPVSLRSLAAGRMSRSSYNLV
PRYIPQKQSEDMHAFVTEVAYKMELLQIENMVLSPWTLIVAVLLQNRPSMDFDALVEKTLWLKGLTQAFG
GFLIWPDNKPAEEVVPASILLHSNIASLVKDQVILKVDSGDSEVVDGLMLQHITLLMCSAYRNQLLNIFV
RPSLVAVALQMTPGFRKEDVYSCFRFLRDVFADEFIFLPGNTLKDFEEGCYLLCKSEAIQVTTKDILVTE
KGNTVLEFLVGLFKPFVESYQIICKYLLSEEEDHFSEEQYLAAVRKFTSQLLDQGTSQCYDVLSSDVQKN
ALAACVRLGVVEKKKINNNCIFNVNEPATTKLEEMLGCKTPIGKPATAKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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