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Report for CCDS4634.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4634.1 Public Homo sapiens 6 H2AC16 24 110 108 CCDS HistoryNCBI Gene:8332Re-query CCDS DB by CCDS ID:4634.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4634.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000613174.2 ENSP00000482538.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000613174.2Link to Ensembl Protein Viewer:ENSP00000482538.2Re-query CCDS DB by Nucleotide ID:ENST00000613174Re-query CCDS DB by Protein ID:ENSP00000482538
Original member Current member NCBI NM_003511.3 NP_003502.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003511.3Link to Protein Sequence:NP_003502.1Re-query CCDS DB by Nucleotide ID:NM_003511Re-query CCDS DB by Protein ID:NP_003502Link to BLAST:NP_003502.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003502.1 130 P0C0S8 130 100% 0 0

Chromosomal Locations for CCDS 4634.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 27865355 27865747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGTCGGGACGCGGCAAGCAGGGAGGCAAAGCTCGCGCCAAAGCCAAGACCCGCTCTTCTCGTGCCGGTC
TCCAGTTCCCCGTGGGCCGAGTGCACCGACTGCTCCGCAAGGGCAACTATGCTGAGCGGGTCGGGGCCGG
CGCGCCGGTGTACCTGGCGGCGGTGCTGGAGTACCTGACTGCCGAGATCCTGGAGCTGGCGGGCAACGCC
GCCCGCGACAACAAGAAGACCCGCATTATCCCGCGCCACTTGCAGCTGGCCATCCGCAACGACGAGGAGC
TCAACAAGCTGCTGGGCAAAGTAACCATCGCTCAGGGTGGTGTCCTGCCCAACATCCAGGCTGTGCTACT
GCCCAAGAAGACCGAGAGTCACCACAAGGCCAAAGGCAAATAA

Translation (130 aa):
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNA
ARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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