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Report for CCDS80631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80631.1 Public Mus musculus 6 Aebp2 23 108 98 CCDS HistoryNCBI Gene:11569Re-query CCDS DB by CCDS ID:80631.1Re-query CCDS DB by GeneID:11569See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80631.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000160836.7 ENSMUSP00000124148.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000160836.7Link to Ensembl Protein Viewer:ENSMUSP00000124148.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000160836Re-query CCDS DB by Protein ID:ENSMUSP00000124148
Original member Current member EBI ENSMUST00000161335.7 ENSMUSP00000125479.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161335.7Link to Ensembl Protein Viewer:ENSMUSP00000125479.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161335Re-query CCDS DB by Protein ID:ENSMUSP00000125479
Original member NCBI NM_001309436.1 NP_001296365.1 Updated not alive Link to Nucleotide Sequence:NM_001309436.1Link to Protein Sequence:NP_001296365.1Re-query CCDS DB by Nucleotide ID:NM_001309436Re-query CCDS DB by Protein ID:NP_001296365
Current member NCBI NM_001309436.2 NP_001296365.1 Accepted alive Link to Nucleotide Sequence:NM_001309436.2Link to Protein Sequence:NP_001296365.1Re-query CCDS DB by Nucleotide ID:NM_001309436Re-query CCDS DB by Protein ID:NP_001296365Link to BLAST:NP_001296365.1
Original member Current member NCBI NM_001309437.1 NP_001296366.1 Accepted alive Link to Nucleotide Sequence:NM_001309437.1Link to Protein Sequence:NP_001296366.1Re-query CCDS DB by Nucleotide ID:NM_001309437Re-query CCDS DB by Protein ID:NP_001296366Link to BLAST:NP_001296366.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001296365.1 288 Q9Z248-3 288 100% 0 0
NP_001296366.1 288 Q9Z248-3 288 100% 0 0

Chromosomal Locations for CCDS 80631.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 140633705 140633896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 140637660 140637767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 140642172 140642358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 140643948 140644072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 140646810 140646877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 140647972 140648085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 140650756 140650782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 140651316 140651361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGA
CTGCTTCAAGCAAACACATTGCCTATAACTGTTGCTGGGACCAGTGCCAGGCATGCTTCAACTCCAGCCC
AGACCTGGCAGACCACATTCGCTCCATACATGTCGATGGTCAGCGTGGAGGGGTGTTCGTTTGCTTGTGG
AAAGGTTGCAAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCGGCACATGCTGACACACA
GTGGAGACAAGCCTTTCAAGTGTGTAGTTGGTGGCTGCAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGC
TCGCCATGTACCCACACACTTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGAA
GAATCTCCTTCTAAAGCTGGAATGAACAAGCGGAGGAAACTAAAGAACAAAAGACGGCGCTCATTACCGC
GGCCACACGATTTCTTCGATGCACAAACACTGGATGCCATAAGACATCGAGCCATCTGCTTTAACCTCTC
TGCTCACATAGAAAGTCTAGGGAAGGGACACAGTGTTGTTTTCCACAGTACTGTAATAGCGAAGAGAAAG
GAGGAATCTGGAAAGATAAAGCTTTTGCTTCATTGGATGCCGGAAGACATTCTGCCAGATGTATGGGTGA
ATGAGAGTGAACGACATCAGTTAAAAACGAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTT
GCTGTTGGACCCAAACATTTACAGAACAATGCCGCAGAAGAGGTTGAAGAGAACTCTGATAAGAAAAATG
TTCAATTTGTATTTAAGCAAACAGTGA

Translation (288 aa):
MDIDSTISSGRSTPAMMNGQGSTTASSKHIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLW
KGCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQQNSSKVSSQPKAKE
ESPSKAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIESLGKGHSVVFHSTVIAKRK
EESGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKLPKDTALLLDPNIYRTMPQKRLKRTLIRKM
FNLYLSKQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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