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Report for CCDS32050.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32050.1 Public Homo sapiens 14 CMTM5 24 110 108 CCDS HistoryNCBI Gene:116173Re-query CCDS DB by CCDS ID:32050.1Re-query CCDS DB by GeneID:116173See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32050.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382809.2 ENSP00000372259.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382809.2Link to Ensembl Protein Viewer:ENSP00000372259.2Re-query CCDS DB by Nucleotide ID:ENST00000382809Re-query CCDS DB by Protein ID:ENSP00000372259
Original member Current member NCBI NM_001037288.2 NP_001032365.1 Accepted alive Link to Nucleotide Sequence:NM_001037288.2Link to Protein Sequence:NP_001032365.1Re-query CCDS DB by Nucleotide ID:NM_001037288Re-query CCDS DB by Protein ID:NP_001032365Link to BLAST:NP_001032365.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032365.1 125 Q96DZ9-6 125 100% 0 0

Chromosomal Locations for CCDS 32050.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 23377252 23377377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23378349 23378501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23379299 23379383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23379474 23379487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGCTCAGTGCTCGAGATCGCCGGGACCGGCACCCTGAGGAGGGGGTAGTTGCAGAGCTCCAGGGCTTCG
CGGTGGACAAGGCCTTCCTCACCTCCCACAAGGGCATCCTGCTGGAAACCGAGCTGGCCCTGACCCTCAT
CATCTTCATCTGCTTCACGGCCTCCATCTCTGCCTACATGGCCGCGGCGCTACTGGAGTTCTTCATCACA
CTTGCCTTCCTCTTCCTCTATGCCACCCAGTACTACCAGCGCTTCGACCGAATTAACTGGCCCTGTCTGG
TTTTTGGCATCATCCTGGTTTCCATCTTTGCCTATGATGCCTTCAAGATCTACCGGACTGAGATGGCACC
CGGGGCCAGCCAGGGGGACCAGCAGTGA

Translation (125 aa):
MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYMAAALLEFFIT
LAFLFLYATQYYQRFDRINWPCLVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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