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Report for CCDS14116.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14116.1 Public Homo sapiens XY AKAP17A 24 110 108 CCDS HistoryNCBI Gene:8227Re-query CCDS DB by CCDS ID:14116.1See the combined annotation on chromosome X in Sequence ViewerSee the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14116.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313871.9 ENSP00000324827.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313871.9Link to Ensembl Protein Viewer:ENSP00000324827.3Re-query CCDS DB by Nucleotide ID:ENST00000313871Re-query CCDS DB by Protein ID:ENSP00000324827
Original member Current member NCBI NM_005088.3 NP_005079.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005088.3Link to Protein Sequence:NP_005079.2Re-query CCDS DB by Nucleotide ID:NM_005088Re-query CCDS DB by Protein ID:NP_005079Link to BLAST:NP_005079.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005079.2 695 Q02040-1 695 100% 0 0

Chromosomal Locations for CCDS 14116.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11) On '+' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
X 1593463 1594224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 1595384 1595532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 1599192 1599432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 1600659 1601594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

Chromosome Start Stop Links
Y 1593463 1594224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 1595384 1595532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 1599192 1599432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 1600659 1601594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2088 nt):
ATGGCAGCGGCTACCATCGTGCACGACACGTCTGAGGCCGTGGAGCTCTGCCCTGCTTACGGCTTGTACC
TGAAGCCCATCACCAAGATGACCATCAGCGTGGCACTCCCGCAGCTGAAGCAGCCGGGGAAGTCCATCTC
CAACTGGGAGGTGATGGAGAGGCTGAAGGGCATGGTGCAGAACCACCAGTTCTCCACGCTGCGTATTTCC
AAGAGCACCATGGACTTCATCCGCTTCGAGGGGGAGGTGGAGAACAAGAGCCTGGTCAAGTCTTTTCTGG
CCTGCCTGGACGGCAAGACCATCAAGCTCAGCGGCTTCTCCGACATCCTGAAGGTGCGCGCGGCCGAGTT
CAAGATCGACTTCCCCACCCGCCACGACTGGGACTCCTTCTTCCGCGACGCCAAGGACATGAACGAGACC
CTGCCGGGGGAGCGGCCGGACACCATCCACCTGGAGGGGCTGCCCTGCAAGTGGTTCGCCCTGAAGGAGT
CGGGCTCCGAGAAGCCCAGCGAGGACGTCCTGGTCAAGGTGTTTGAGAAGTTCGGGGAGATCCGGAATGT
GGACATCCCCATGCTGGACCCCTACCGGGAGGAGATGACGGGCCGCAACTTCCACACCTTCAGTTTCGGG
GGGCACTTGAACTTCGAGGCCTATGTGCAGTACCGCGAGTACATGGGCTTCATCCAGGCCATGAGCGCCC
TGCGCGGGATGAAACTCATGTACAAGGGCGAGGACGGCAAGGCCGTGGCCTGCAACATCAAGGTTTCTTT
TGATTCGACCAAACACCTGAGTGATGCCTCAATTAAGAAGCGGCAGCTGGAGAGGCAGAAGCTTCAGGAA
CTGGAGCAGCAAAGAGAAGAACAAAAGCGCAGAGAGAAGGAAGCGGAGGAGAGGCAGCGAGCGGAGGAAA
GGAAACAAAAGGAGCTGGAAGAGCTGGAGCGAGAGAGGAAAAGAGAAGAGAAGCTTCGCAAGAGGGAGCA
GAAGCAGAGGGACCGTGAGCTGCGCCGGAATCAGAAGAAGCTGGAGAAGCTGCAGGCGGAGGAGCAGAAG
CAGCTGCAGGAGAAGATCAAGCTGGAGGAGCGCAAGCTGCTGCTGGCCCAGAGGAACCTGCAGTCCATCC
GGCTCATCGCCGAGCTGCTCAGCAGAGCCAAGGCTGTGAAGCTACGGGAACAGGAGCAGAAGGAGGAGAA
GCTGAGGCTCCAGCAGCAGGAGGAGCGGCGGCGGCTGCAGGAGGCCGAGCTGCGGCGCGTGGAGGAGGAG
AAGGAGCGCGCGCTGGGCCTGCAGCGGAAAGAGCGGGAGCTGCGCGAGCGGCTGCTGAGCATCCTGCTGA
GCAAGAAGCCGGACGACAGCCACACACACGACGAGCTGGGCGTGGCACACGCCGACCTGCTGCAGCCCGT
CCTGGACATCCTGCAGACCGTGTCGTCCGGCTGTGTGAGCGCCACCACGCTGCACCCCCTCGGGGGCCAG
CCCCCGGCCGGTGCCCCCAAGGAGAGCCCGGCCCACCCAGAGGCCGACGGCGCTCCCAAAAGCGTGAACG
GGAGCGTGGCCGAGGAGGCCCCATGCAAGGAGGTTCAGAGCTCCTGTCGTGTGGTCCCCGAGGATGGCTC
TCCAGAGAAGAGGTGCCCGGGCGGCGTCCTCTCCTGCATTCCTGACAACAACCAACAGCCCAAGGGCATC
CCTGCCTGCGAGCAGAATGTCTCCAGAAAGGACACCCGGTCAGAACAGGACAAGTGCAACCGGGAGCCCA
GCAAGGGCCGGGGCCGGGCCACCGGAGACGGGCTTGCTGACCGGCACAAGCGGGAGAGGAGCCGGGCCAG
GCGGGCCAGCAGCAGGGAGGACGGGAGGCCACGCAAGGAGCGGCGGCCCCACAAGAAGCACGCCTACAAG
GATGACAGCCCCCGCCGGCGCAGCACGAGCCCGGACCACACCCGGTCCCGGAGGTCCCACAGCAAAGACA
GGCACCGGAGGGAGCGGAGCCGGGAGCGGAGGGGCAGCGCCAGCAGGAAGCACAGCCGCCACCGCCGCCG
AAGCGAGCGGTCGCGCTCCCGGTCCCCGAGCAGGCACCGCAGTACCTGGAACAGGTAA

Translation (695 aa):
MAAATIVHDTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRIS
KSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNET
LPGERPDTIHLEGLPCKWFALKESGSEKPSEDVLVKVFEKFGEIRNVDIPMLDPYREEMTGRNFHTFSFG
GHLNFEAYVQYREYMGFIQAMSALRGMKLMYKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQE
LEQQREEQKRREKEAEERQRAEERKQKELEELERERKREEKLRKREQKQRDRELRRNQKKLEKLQAEEQK
QLQEKIKLEERKLLLAQRNLQSIRLIAELLSRAKAVKLREQEQKEEKLRLQQQEERRRLQEAELRRVEEE
KERALGLQRKERELRERLLSILLSKKPDDSHTHDELGVAHADLLQPVLDILQTVSSGCVSATTLHPLGGQ
PPAGAPKESPAHPEADGAPKSVNGSVAEEAPCKEVQSSCRVVPEDGSPEKRCPGGVLSCIPDNNQQPKGI
PACEQNVSRKDTRSEQDKCNREPSKGRGRATGDGLADRHKRERSRARRASSREDGRPRKERRPHKKHAYK
DDSPRRRSTSPDHTRSRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSRHRSTWNR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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