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Report for CCDS32401.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32401.1 Public Homo sapiens 16 ACSM2A 24 110 108 CCDS HistoryNCBI Gene:123876Re-query CCDS DB by CCDS ID:32401.1Re-query CCDS DB by GeneID:123876See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32401.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219054.10 ENSP00000219054.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000219054.10Link to Ensembl Protein Viewer:ENSP00000219054.6Re-query CCDS DB by Nucleotide ID:ENST00000219054Re-query CCDS DB by Protein ID:ENSP00000219054
Original member Current member EBI ENST00000396104.2 ENSP00000379411.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396104.2Link to Ensembl Protein Viewer:ENSP00000379411.2Re-query CCDS DB by Nucleotide ID:ENST00000396104Re-query CCDS DB by Protein ID:ENSP00000379411
Original member Current member EBI ENST00000573854.6 ENSP00000459451.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000573854.6Link to Ensembl Protein Viewer:ENSP00000459451.1Re-query CCDS DB by Nucleotide ID:ENST00000573854Re-query CCDS DB by Protein ID:ENSP00000459451
Original member Current member EBI ENST00000575690.5 ENSP00000460349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575690.5Link to Ensembl Protein Viewer:ENSP00000460349.1Re-query CCDS DB by Nucleotide ID:ENST00000575690Re-query CCDS DB by Protein ID:ENSP00000460349
Original member Current member NCBI NM_001308172.2 NP_001295101.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001308172.2Link to Protein Sequence:NP_001295101.1Re-query CCDS DB by Nucleotide ID:NM_001308172Re-query CCDS DB by Protein ID:NP_001295101Link to BLAST:NP_001295101.1
Original member Current member NCBI NM_001308954.2 NP_001295883.1 Accepted alive Link to Nucleotide Sequence:NM_001308954.2Link to Protein Sequence:NP_001295883.1Re-query CCDS DB by Nucleotide ID:NM_001308954Re-query CCDS DB by Protein ID:NP_001295883Link to BLAST:NP_001295883.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295101.1 577 Q08AH3 577 100% 0 0
NP_001295883.1 577 Q08AH3 577 100% 0 0

Chromosomal Locations for CCDS 32401.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 20460115 20460291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20465517 20465727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20469512 20469719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20471073 20471216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20471536 20471689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20475362 20475441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20475650 20475773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20477369 20477449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20478576 20478677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20480573 20480700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20480822 20480921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20483058 20483177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20486574 20486678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1734 nt):
ATGCATTGGCTGCGAAAAGTTCAGGGACTTTGCACCCTGTGGGGTACTCAGATGTCCAGCCGCACTCTCT
ACATTAATAGTAGGCAACTGGTGTCCCTGCAGTGGGGCCACCAGGAAGTGCCGGCCAAGTTTAACTTTGC
TAGTGATGTGTTGGATCACTGGGCTGACATGGAGAAGGCTGGCAAGCGACTCCCAAGCCCAGCCCTGTGG
TGGGTGAATGGGAAGGGGAAGGAATTAATGTGGAATTTCAGAGAACTGAGTGAAAACAGCCAGCAGGCAG
CCAACGTCCTCTCGGGAGCCTGTGGCCTGCAGCGTGGGGATCGTGTGGCAGTGGTGCTGCCCCGAGTGCC
TGAGTGGTGGCTGGTGATCCTGGGCTGCATTCGAGCAGGTCTCATCTTTATGCCTGGAACCATCCAGATG
AAATCCACTGACATACTGTATAGGTTGCAGATGTCTAAGGCCAAGGCTATTGTTGCTGGGGATGAAGTCA
TCCAAGAAGTGGACACAGTGGCATCTGAATGTCCTTCTCTGAGAATTAAGCTACTGGTGTCTGAGAAAAG
CTGTGATGGGTGGCTGAACTTCAAGAAACTACTAAATGAGGCATCCACCACTCATCACTGTGTGGAGACT
GGAAGCCAGGAAGCATCTGCCATCTACTTCACTAGTGGGACCAGTGGTCTTCCCAAGATGGCAGAACATT
CCTACTCGAGCCTGGGCCTCAAGGCCAAGATGGATGCTGGTTGGACAGGCCTGCAAGCCTCTGATATAAT
GTGGACCATATCAGACACAGGTTGGATACTGAACATCTTGTGCTCACTTATGGAACCTTGGGCATTAGGA
GCATGCACATTTGTTCATCTCTTGCCAAAGTTTGACCCACTGGTTATTCTAAAGACACTCTCCAGTTATC
CAATCAAGAGTATGATGGGTGCCCCCATTGTTTACCGGATGTTGCTACAGCAGGATCTTTCCAGTTACAA
GTTCCCCCATCTACAGAACTGCGTCACTGTAGGGGAGTCCCTTCTTCCAGAAACTCTGGAGAACTGGAGG
GCCCAGACAGGACTGGACATCCGAGAATCCTATGGCCAGACAGAAACGGGATTAACTTGCATGGTTTCCA
AGACAATGAAAATCAAACCAGGATACATGGGAACGGCTGCTTCCTGTTATGATGTACAGATCATAGATGA
TAAGGGCAACGTCCTGCCCCCCGGCACAGAAGGAGACATTGGCATCAGGGTCAAACCCATCAGGCCTATA
GGCATCTTCTCTGGCTATGTGGACAATCCCGACAAGACAGCAGCCAACATTCGAGGAGACTTTTGGCTCC
TTGGAGACCGGGGAATCAAAGATGAAGATGGGTATTTCCAGTTTATGGGACGGGCAAATGATATCATTAA
CTCCAGCGGGTACCGGATTGGACCCTCGGAGGTAGAGAATGCACTGATGGAGCACCCTGCTGTGGTTGAG
ACGGCTGTGATCAGCAGCCCAGACCCCGTCCGAGGAGAGGTGGTGAAGGCATTTGTGGTCCTGGCCTCGC
AGTTCCTGTCCCATGACCCAGAACAGCTCACCAAGGAGCTGCAGCAGCATGTGAAGTCAGTGACAGCCCC
ATACAAGTACCCAAGAAAGATAGAGTTTGTCTTGAACCTGCCCAAGACTGTCACAGGGAAAATTCAACGA
GCCAAGCTTCGAGACAAGGAGTGGAAGATGTCCGGAAAAGCCCGTGCGCAGTGA

Translation (577 aa):
MHWLRKVQGLCTLWGTQMSSRTLYINSRQLVSLQWGHQEVPAKFNFASDVLDHWADMEKAGKRLPSPALW
WVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQM
KSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLNEASTTHHCVET
GSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALG
ACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSSYKFPHLQNCVTVGESLLPETLENWR
AQTGLDIRESYGQTETGLTCMVSKTMKIKPGYMGTAASCYDVQIIDDKGNVLPPGTEGDIGIRVKPIRPI
GIFSGYVDNPDKTAANIRGDFWLLGDRGIKDEDGYFQFMGRANDIINSSGYRIGPSEVENALMEHPAVVE
TAVISSPDPVRGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQR
AKLRDKEWKMSGKARAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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