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Report for CCDS77160.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77160.1 Public Homo sapiens 18 ABHD3 24 110 108 CCDS HistoryNCBI Gene:171586Re-query CCDS DB by CCDS ID:77160.1Re-query CCDS DB by GeneID:171586See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77160.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000580981.5 ENSP00000462935.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000580981.5Link to Ensembl Protein Viewer:ENSP00000462935.1Re-query CCDS DB by Nucleotide ID:ENST00000580981Re-query CCDS DB by Protein ID:ENSP00000462935
Original member Current member NCBI NM_001308256.2 NP_001295185.1 Accepted alive Link to Nucleotide Sequence:NM_001308256.2Link to Protein Sequence:NP_001295185.1Re-query CCDS DB by Nucleotide ID:NM_001308256Re-query CCDS DB by Protein ID:NP_001295185Link to BLAST:NP_001295185.1

Chromosomal Locations for CCDS 77160.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 21651591 21651763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21656861 21657026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21657104 21657152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21659170 21659343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21702316 21702498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21703584 21703747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21704504 21704665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1071 nt):
ATGCAGCGCCTGGCCATGGACCTGCGGATGTTGTCCCGGGAGCTCTCCCTCTACCTGGAACACCAAGTCC
GGGTGGGGTTCTTCGGCTCGGGGGTGGGCTTATCCCTTATCCTGGGCTTCAGCGTCGCTTATGCCTTCTA
CTACCTGAGCAGCATTGCCAAGAAACCCCAGTTAGTGACCGGGGGTGAGAGTTTCAGCCGCTTCCTTCAA
GACCACTGTCCCGTGGTTACAGAAACGTACTACCCGACGGTCTGGTGCTGGGAGGGTCGAGGACAGACCC
TGCTTAGACCTTTCATCACTTCGAAGCCCCCGGTGCAGTACAGGAATGAACTTATTAAAACTGCAGATGG
AGGACAGATTTCACTGGACTGGTTTGATAATGATAACAGTACGTGTTATATGGATGCCAGCACCAGACCT
ACTATCTTATTGTTGCCTGGCCTCACGGGAACAAGCAAGGAGTCATATATCCTTCATATGATCCATCTTA
GTGAAGAATTAGGATACAGAATGCTGCTTCTAAATTACTTGGGCAAAATTGGGTCCAAAACGCCTTTGAT
GGCAGCTGCAACTTTTTCCGTTGGTTGGAACACCTTCGCTTGCTCAGAGTCATTGGAAAAACCACTGAAC
TGGCTACTTTTTAATTACTATTTGACAACCTGCCTTCAGTCTTCAGTTAATAAGCACCGACATATGTTTG
TAAAACAAGTTGATATGGATCATGTCATGAAGGCTAAATCCATCAGAGAGTTTGATAAGCGATTCACTTC
AGTCATGTTTGGATACCAAACAATTGATGATTATTATACTGATGCCAGTCCGAGTCCTAGACTGAAGTCA
GTAGGAATTCCAGTATTGTGTCTAAATTCTGTGGATGATGTTTTCTCACCCAGTCATGCTATTCCAATAG
AAACTGCTAAGCAAAATCCTAATGTTGCTTTGGTCCTTACTTCTTATGGAGGCCATATTGGTTTTCTGGA
GGGAATCTGGCCAAGACAGTCCACTTACATGGATCGTGTCTTCAAGCAATTTGTGCAAGCCATGGTTGAG
CATGGACATGAACTCTCTTAA

Translation (356 aa):
MQRLAMDLRMLSRELSLYLEHQVRVGFFGSGVGLSLILGFSVAYAFYYLSSIAKKPQLVTGGESFSRFLQ
DHCPVVTETYYPTVWCWEGRGQTLLRPFITSKPPVQYRNELIKTADGGQISLDWFDNDNSTCYMDASTRP
TILLLPGLTGTSKESYILHMIHLSEELGYRMLLLNYLGKIGSKTPLMAAATFSVGWNTFACSESLEKPLN
WLLFNYYLTTCLQSSVNKHRHMFVKQVDMDHVMKAKSIREFDKRFTSVMFGYQTIDDYYTDASPSPRLKS
VGIPVLCLNSVDDVFSPSHAIPIETAKQNPNVALVLTSYGGHIGFLEGIWPRQSTYMDRVFKQFVQAMVE
HGHELS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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