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Report for CCDS10517.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10517.1 Public Homo sapiens 16 HMOX2 24 110 108 CCDS HistoryNCBI Gene:3163Re-query CCDS DB by CCDS ID:10517.1Re-query CCDS DB by GeneID:3163See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10517.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219700.10 ENSP00000219700.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000219700.10Link to Ensembl Protein Viewer:ENSP00000219700.6Re-query CCDS DB by Nucleotide ID:ENST00000219700Re-query CCDS DB by Protein ID:ENSP00000219700
Original member Current member EBI ENST00000398595.7 ENSP00000381595.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398595.7Link to Ensembl Protein Viewer:ENSP00000381595.3Re-query CCDS DB by Nucleotide ID:ENST00000398595Re-query CCDS DB by Protein ID:ENSP00000381595
Original member Current member EBI ENST00000406590.6 ENSP00000385100.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406590.6Link to Ensembl Protein Viewer:ENSP00000385100.2Re-query CCDS DB by Nucleotide ID:ENST00000406590Re-query CCDS DB by Protein ID:ENSP00000385100
Original member Current member EBI ENST00000414777.5 ENSP00000391637.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414777.5Link to Ensembl Protein Viewer:ENSP00000391637.1Re-query CCDS DB by Nucleotide ID:ENST00000414777Re-query CCDS DB by Protein ID:ENSP00000391637
Original member Current member EBI ENST00000458134.7 ENSP00000394103.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000458134.7Link to Ensembl Protein Viewer:ENSP00000394103.3Re-query CCDS DB by Nucleotide ID:ENST00000458134Re-query CCDS DB by Protein ID:ENSP00000394103
Original member Current member EBI ENST00000570646.6 ENSP00000459214.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000570646.6Link to Ensembl Protein Viewer:ENSP00000459214.1Re-query CCDS DB by Nucleotide ID:ENST00000570646Re-query CCDS DB by Protein ID:ENSP00000459214
Original member Current member EBI ENST00000619528.4 ENSP00000484423.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619528.4Link to Ensembl Protein Viewer:ENSP00000484423.1Re-query CCDS DB by Nucleotide ID:ENST00000619528Re-query CCDS DB by Protein ID:ENSP00000484423
Original member Current member EBI ENST00000619913.4 ENSP00000484467.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619913.4Link to Ensembl Protein Viewer:ENSP00000484467.1Re-query CCDS DB by Nucleotide ID:ENST00000619913Re-query CCDS DB by Protein ID:ENSP00000484467
Original member Current member NCBI NM_001127204.2 NP_001120676.1 Accepted alive Link to Nucleotide Sequence:NM_001127204.2Link to Protein Sequence:NP_001120676.1Re-query CCDS DB by Nucleotide ID:NM_001127204Re-query CCDS DB by Protein ID:NP_001120676Link to BLAST:NP_001120676.1
Original member Current member NCBI NM_001127205.2 NP_001120677.1 Accepted alive Link to Nucleotide Sequence:NM_001127205.2Link to Protein Sequence:NP_001120677.1Re-query CCDS DB by Nucleotide ID:NM_001127205Re-query CCDS DB by Protein ID:NP_001120677Link to BLAST:NP_001120677.1
Original member Current member NCBI NM_001127206.3 NP_001120678.1 Accepted alive Link to Nucleotide Sequence:NM_001127206.3Link to Protein Sequence:NP_001120678.1Re-query CCDS DB by Nucleotide ID:NM_001127206Re-query CCDS DB by Protein ID:NP_001120678Link to BLAST:NP_001120678.1
Original member Current member NCBI NM_001286268.2 NP_001273197.1 Accepted alive Link to Nucleotide Sequence:NM_001286268.2Link to Protein Sequence:NP_001273197.1Re-query CCDS DB by Nucleotide ID:NM_001286268Re-query CCDS DB by Protein ID:NP_001273197Link to BLAST:NP_001273197.1
Original member Current member NCBI NM_001286269.2 NP_001273198.1 Accepted alive Link to Nucleotide Sequence:NM_001286269.2Link to Protein Sequence:NP_001273198.1Re-query CCDS DB by Nucleotide ID:NM_001286269Re-query CCDS DB by Protein ID:NP_001273198Link to BLAST:NP_001273198.1
Original member Current member NCBI NM_001286270.2 NP_001273199.1 Accepted alive Link to Nucleotide Sequence:NM_001286270.2Link to Protein Sequence:NP_001273199.1Re-query CCDS DB by Nucleotide ID:NM_001286270Re-query CCDS DB by Protein ID:NP_001273199Link to BLAST:NP_001273199.1
Original member Current member NCBI NM_002134.4 NP_002125.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002134.4Link to Protein Sequence:NP_002125.3Re-query CCDS DB by Nucleotide ID:NM_002134Re-query CCDS DB by Protein ID:NP_002125Link to BLAST:NP_002125.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120676.1 316 P30519-1 316 100% 0 0
NP_001120677.1 316 P30519-1 316 100% 0 0
NP_001120678.1 316 P30519-1 316 100% 0 0
NP_001273197.1 316 P30519-1 316 100% 0 0
NP_001273198.1 316 P30519-1 316 100% 0 0
NP_001273199.1 316 P30519-1 316 100% 0 0
NP_002125.3 316 P30519-1 316 100% 0 0

Chromosomal Locations for CCDS 10517.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4505525 4505610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4506895 4507012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4507713 4508204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4509412 4509538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4509629 4509756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGTCAGCGGAAGTGGAAACCTCAGAGGGGGTAGACGAGTCAGAAAAAAAGAACTCTGGGGCCCTAGAAA
AGGAGAACCAAATGAGAATGGCTGACCTCTCGGAGCTCCTGAAGGAAGGGACCAAGGAAGCACACGACCG
GGCAGAAAACACCCAGTTTGTCAAGGACTTCTTGAAAGGCAACATTAAGAAGGAGCTGTTTAAGCTGGCC
ACCACGGCACTTTACTTCACATACTCAGCCCTCGAGGAGGAAATGGAGCGCAACAAGGACCATCCAGCCT
TTGCCCCTTTGTACTTCCCCATGGAGCTGCACCGGAAGGAGGCGCTGACCAAGGACATGGAGTATTTCTT
TGGTGAAAACTGGGAGGAGCAGGTGCAGTGCCCCAAGGCTGCCCAGAAGTACGTGGAGCGGATCCACTAC
ATAGGGCAGAACGAGCCGGAGCTACTGGTGGCCCATGCATACACCCGCTACATGGGGGATCTCTCGGGGG
GCCAGGTGCTGAAGAAGGTGGCCCAGCGAGCACTGAAACTCCCCAGCACAGGGGAAGGGACCCAGTTCTA
CCTGTTTGAGAATGTGGACAATGCCCAGCAGTTCAAGCAGCTCTACCGGGCCAGGATGAACGCCCTGGAC
CTGAACATGAAGACCAAAGAGAGGATCGTGGAGGAGGCCAACAAGGCTTTTGAGTATAACATGCAGATAT
TCAATGAACTGGACCAGGCCGGCTCCACACTGGCCAGAGAGACCTTGGAGGATGGGTTCCCTGTACACGA
TGGGAAAGGAGACATGCGTAAATGCCCTTTCTACGCTGCTGAACAAGACAAAGGTGCCCTGGAGGGCAGC
AGCTGTCCCTTCCGAACAGCTATGGCTGTGCTGAGGAAGCCCAGCCTCCAGTTCATCCTGGCCGCTGGTG
TGGCCCTAGCTGCTGGACTCTTGGCCTGGTACTACATGTGA

Translation (316 aa):
MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLA
TTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHY
IGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALD
LNMKTKERIVEEANKAFEYNMQIFNELDQAGSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGS
SCPFRTAMAVLRKPSLQFILAAGVALAAGLLAWYYM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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