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Report for CCDS31281.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31281.1 Public Homo sapiens 10 CFAP43 24 110 108 CCDS HistoryNCBI Gene:80217Re-query CCDS DB by CCDS ID:31281.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31281.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357060.8 ENSP00000349568.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357060.8Link to Ensembl Protein Viewer:ENSP00000349568.3Re-query CCDS DB by Nucleotide ID:ENST00000357060Re-query CCDS DB by Protein ID:ENSP00000349568
Original member Current member NCBI NM_025145.7 NP_079421.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025145.7Link to Protein Sequence:NP_079421.5Re-query CCDS DB by Nucleotide ID:NM_025145Re-query CCDS DB by Protein ID:NP_079421Link to BLAST:NP_079421.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079421.5 1665 Q8NDM7-1 1665 100% 0 0

Chromosomal Locations for CCDS 31281.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 104130139 104130305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104131331 104131484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104132116 104132196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104133620 104133784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104140842 104141001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104142281 104142393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104143426 104143639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104145476 104145564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104146263 104146349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104147891 104147998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104152607 104152726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104161037 104161162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104161961 104162041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104162317 104162403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104164094 104164300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104166488 104166718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104167621 104167737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104168744 104168848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104172410 104172535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104179029 104179106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104179840 104179932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104182366 104182513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104185016 104185146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104185974 104186123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104187320 104187492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104188270 104188410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104192199 104192302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104193866 104194014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104196853 104196933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104197922 104198038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104203672 104203803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104205963 104206030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104207665 104207824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104212007 104212157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104214259 104214426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104225461 104225557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104230590 104230843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104232182 104232246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4998 nt):
ATGGCGCAAGGCCGGGAGCGCGACGAAGGCCCCCACTCCGCCGGCGGCGCGTCCTTGTCCGTGAGATGGG
TGCAAGGATTCCCTAAGCAGAATGTTCATTTTGTCAACGACAACACCATTTGCTACCCTTGTGGGAATTA
TGTAATATTTATTAATATTGAAACCAAGAAAAAGACTGTACTGCAGTGTAGTAATGGAATTGTGGGCGTC
ATGGCAACTAACATCCCCTGTGAAGTTGTGGCTTTTTCTGACCGGAAGCTAAAACCTCTCATCTACGTAT
ACAGCTTTCCAGGATTGACCAGAAGGACCAAATTGAAAGGCAACATTCTCCTGGACTACACTTTACTTTC
ATTCAGTTACTGTGGCACCTACCTGGCTAGTTACTCCTCTCTCCCAGAATTTGAACTGGCCCTTTGGAAC
TGGGAATCGAGTATCATTTTGTGTAAGAAATCACAGCCTGGAATGGATGTGAACCAAATGTCTTTTAACC
CCATGAACTGGCGCCAGCTGTGCTTATCAAGTCCAAGTACAGTGAGCGTGTGGACCATTGAAAGAAGTAA
CCAGGAGCATTGTTTCAGAGCAAGGTCGGTGAAATTACCTCTAGAAGATGGGTCATTTTTTAATGAAACG
GATGTCGTTTTCCCCCAGTCGTTGCCGAAAGATCTCATCTATGGTCCCGTGCTGCCACTGTCAGCCATTG
CCGGGCTGGTAGGCAAAGAGGCAGAGACTTTCCGGCCGAAAGATGATCTATATCCTTTGCTTCACCCGAC
TATGCATTGCTGGACTCCAACAAGTGACTTGTACATTGGCTGTGAAGAGGGTCATCTTTTAATGATTAAT
GGAGACACCTTGCAAGTGACTGTACTTAATAAGATAGAAGAGGAATCGCCATTGGACAGAAGAAATTTTA
TCAGTCCAGTAACCTTGGTATATCAGAAGGAGGGCGTGCTGGCTTCTGGAATTGATGGCTTTGTGTATTC
TTTTATTATTAAAGATAGAAGTTACATGATCGAGGATTTTCTTGAGATTGAAAGACCTGTAGAACATATG
ACATTTTCTCCCAATTATACAGTGTTGCTGATTCAAACAGACAAGGGATCTGTTTATATCTACACTTTTG
GTAAGGAGCCAACCTTAAATAAAGTCCTAGATGCTTGTGATGGGAAATTTCAGGCAATTGACTTTATCAC
ACCTGGAACCCAATACTTCATGACACTTACATATTCAGGGGAAATTTGTGTTTGGTGGCTGGAGGATTGT
GCTTGTGTAAGCAAGATTTATCTGAATACCCTAGCAACGGTTCTGGCTTGCTGTCCATCCTCCCTCTCTG
CAGCCGTGGGCACGGAGGATGGCTCGGTCTACTTCATCAGCGTATATGATAAGGAATCCCCTCAGGTCGT
GCACAAGGCCTTTCTCTCGGAATCGTCCGTGCAGCACGTCGTTTATGATCAGCAAGGAATATTTCTGTTA
GTTGGAACAGCAGAAGGAAAAGTCTTTATTATCAATGCCAACTCCTCAAGCTCATTTCAGATTATTGGAT
TCACAGAGGTGGCCAAAGACATTTTACAGATATCCACAGTGTCTCTTTTAGAAACAGACATAGTGGAAGT
GATGGTGCTTTCCTCGCTTCCAGAAGCAGGGAGAAGCAGGTTGGAGATGTTCACACTGCCTACATTACTG
CCACAAGTTTCCACAACCTTTGCTGATGAAAGAGGAAGGCTGAAAGATGAAATCATTCATAAGTACCTGT
ATGAGTTGGAGCACGCTCTGTCCTCTGCAGTCTTGGGCTTTCAAAGTAACCAAATATATGGCTTCTGTAG
TCAAGTGCCATACATCTGTAGCTACCTTCTTCCTGAAGAAGAACATACCGGTATCTACATTCTTAAACCA
TACAAAAAAGTACAAAGCAGACAGTATGGACCTGGACTGCTCTATCTGTCTTCACATGGATTGTGGCTCA
TAACAATAGCTAAATGTGGAATTCTGTGTATCCGAGACGTTTATACTTTGGAAACATTTGCTTGGTGTCG
GAGTCATTCTCACCAGGGTCATGGGATTCAGTCAATGAGAATTTCAATGGATGGACAAAACATTCTGGTG
AATGGGAGAGATGATGGCACCCTTGTCTACCTAAAGTGGAAGCGATTTGGAGGACACCTAGCCAGTGAAA
TTCTGGACTATTACCAGAAACTATTAATTTCCCTGAGCAGCGCCATGGACAAGGAGAATCATTATTTAAG
CACAACACCAAAAGTTTCCGTAGATTTGGGATCCGATTCTGAACACACAAAACAGAAGGCAAGCACTGAC
TTATCACAAGATGAATTAGTTCTAACCGATGTTAAGAAGGAAATTCCTTGGATACAACAAAAAAGCCAAG
AGGCCATCAAAAAGGAGGTTAATCTGTTTTCCAAGAAAAGGAAAGAGATAAAACAAGGAATCAAATCACT
TTCCAAAACTATTCTGAATATGATGGAAGAAAATGACAAACTAGAAAATATTGCAAAATTAGACCAACAG
GAATTTGGTCTGGATCTTGAGGAACTAGAAAGGCTTCATGATGAAAGTCAGGAAGAAGTGGCAAAGATGA
TAAAGGATGTAGAGATGCATAACTTAGCCAAGAGCTATTTGGCTGAACTTATCAAAGAAGAATGTTGGAA
TTCGATGGCTGTGAAAGGTCGAGCTCTTAAGTGTTTTCATATCCCCTGTGTGGTTGAAAACTTCCCGATG
AAAGCGCGCACGGTTGAAGAGCTGAAAGAATTGGAAAGAGTTTTACAGCAAAAGAAGATTGAAGCAGAGT
GTCTTAAACTACGGAAGGAAATTGTAGAGGCTCAGTCTGGAGTTAAGTTGATTAAACAGCGTCATGAAGA
GGATGATGAAGAAGAGGAAGAGGAAGACAAGACAGTAAAATATAGCAATTTGCCCAATTACCTGCTTGGT
AGTCTGAGTACTGATTTTGGGGTAGATACCTCTTTATTGTCAAGCCAATTGGAGCTTCATTCCAGAGAAG
AGAAAATCAACCAAATTATATTATTGAAAGATATCATTTACAAGGTAAAAACTGTTTTCAATAATGAGTT
TGACGCTGCATATAAACAAAAAGAGTTTGAAATTGCACGCGTGAAGGAAAGAAATGTTCGAATTCGAGAA
ATTATTTTAGATCTGGAATTGGAAGAAGCAGTCTGGCAACCAGAATTTGAAGACTGTGAGAAGCCAGAGA
GAACGCTTGTTGTGCAAGATGAGGAGATTACAGCCCACAAACACATTAAGCCGTGGCACAAAGCCAAAGA
ATTGATCGTGAATCATGAAAAGGAGCACTGGCTTCTGATACAGGATGCCAGTACAAGACTCCGAGCTCTG
ATGGACATGATGGGAGGAGTTCTGGAAGTCAAGAAGGAAGATATTTTGAGAATGGTGATTCCTCAACCTG
CTTTCATGGCAAAACCTGATGCTGTGTGGACTGAAGAAGAAAGAAAACAATTCAAAGATTATGAGAAAAA
AGTAAAGGAGTTAAATGAAGAAAGAGATAAGTATAGAAAGTCATTAGAAGCAGAACTGAAGAAACTTCAA
AACTCTATTCAAGAAAGCACACAGGCCTTTGATGAACATTTGAAAAGACTTTTTGAAAGGAGAGTGAAGG
CAGAGATGGTTACCAACCAGGAGGAACTGAAAATAAGTAACCTTGCATTTTCTTTATTGTTGGATGAAGA
ATTAAGCTCTAGAGAAAAATTCCTGAACAACTACCTTACAAGGAAACAGCACGAGAAAAGCCAGACTTCA
GAAGCTGTTCGGAAATCTAGAGAAGACCTGGATGTGTGCAAGGAGCACTATGACAACTTACTGGCAGAAG
ACAAAGTTATGGATCGCAGCTTTAAAAAGGAATTTTCTGAAATTCCTGGTCATCAAGTGGATATACTCTA
CAAACTTTTTAAACGCCGACCAAGGATTTCCAAACAGAAAACGCACTCAGAAACAACCAGCGTTGTCCCT
TTCGGAGAACTACCAGGATCTGGCAAGTTGAATAAGGATGCCTTTGCCCAGTTAATGAAAGCTATGGATG
AGTTGGACAATATTAGTAACATGCCAGAAGGCTTGGACCCTTTGGTCTGGAATCATTTCTGCATGACAAG
ACGAGCAAAAGTGGAAAATGAACAGAAAGTAAAGCAGAAAGCAGCTGACTTATTGGAAATGGCAACTTTC
CTCCAGAAGAGAGTTGAGGAGGAAGAGAAGGTGCAACAGGAGATTGAGAGAGTGTTCCATGAACTCATCC
TATTACAGGAAGAGAAAGTGAGATTCCAGTTGAATTTGACAATCCAAATTCTTCTTAAACAAGGACAAGT
AGAACTGGAAAATTTCCAGCTAGTACTGGAGTATTCTGATGCAATTCTCATCAACAAGAACATAATTGAA
GACTTGAATTCTGTGATTCGGACTCAAGGACAAAAGAAAGTTGCTAGCATGATGGAAAGTAAAGATGTAC
ACAAAAGAATACTTCAGATTGAGTGGGAACATAAGAAAATGGAGATGGAAAGGGAAGATCTAAATCAGAA
GGCTTGGGATATTCAGATGCTATTTTTTTCAAGAGATCGTCAAAAGTACCTAAATGAACCAAACTATGAG
GCTCTGATTAGTATTCAGATTGGAATAATGGAACAAACCATTGCTGTTTTAGATAAGATGCACAAAAAGA
ATGTGGAAAACTGCAAGAAACTACTCAAAAAACTTGGAAAGTTCAGCAATCAAAAAGATATAGCAAATTA
TGCCCTAAGCTGCAATCTACGAGAAGAGTTGGTAGCTGTCTCAGAGAGAAAAGACATCTGTAATGCAATG
GGGTCTAAACTGACTTGTGAAAAGATTGTCAAAGAACGGTATGAAAACATGATGCAACAGCAGAAGTTAA
CAAATATTTCAAAACAACAAGCTGAACAGATTTCAATACTACAGACTGAAGTTGAAAGATTAAGAATGAA
AACATTTCCTGCTCTTGTTCAAATGTAA

Translation (1665 aa):
MAQGRERDEGPHSAGGASLSVRWVQGFPKQNVHFVNDNTICYPCGNYVIFINIETKKKTVLQCSNGIVGV
MATNIPCEVVAFSDRKLKPLIYVYSFPGLTRRTKLKGNILLDYTLLSFSYCGTYLASYSSLPEFELALWN
WESSIILCKKSQPGMDVNQMSFNPMNWRQLCLSSPSTVSVWTIERSNQEHCFRARSVKLPLEDGSFFNET
DVVFPQSLPKDLIYGPVLPLSAIAGLVGKEAETFRPKDDLYPLLHPTMHCWTPTSDLYIGCEEGHLLMIN
GDTLQVTVLNKIEEESPLDRRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDRSYMIEDFLEIERPVEHM
TFSPNYTVLLIQTDKGSVYIYTFGKEPTLNKVLDACDGKFQAIDFITPGTQYFMTLTYSGEICVWWLEDC
ACVSKIYLNTLATVLACCPSSLSAAVGTEDGSVYFISVYDKESPQVVHKAFLSESSVQHVVYDQQGIFLL
VGTAEGKVFIINANSSSSFQIIGFTEVAKDILQISTVSLLETDIVEVMVLSSLPEAGRSRLEMFTLPTLL
PQVSTTFADERGRLKDEIIHKYLYELEHALSSAVLGFQSNQIYGFCSQVPYICSYLLPEEEHTGIYILKP
YKKVQSRQYGPGLLYLSSHGLWLITIAKCGILCIRDVYTLETFAWCRSHSHQGHGIQSMRISMDGQNILV
NGRDDGTLVYLKWKRFGGHLASEILDYYQKLLISLSSAMDKENHYLSTTPKVSVDLGSDSEHTKQKASTD
LSQDELVLTDVKKEIPWIQQKSQEAIKKEVNLFSKKRKEIKQGIKSLSKTILNMMEENDKLENIAKLDQQ
EFGLDLEELERLHDESQEEVAKMIKDVEMHNLAKSYLAELIKEECWNSMAVKGRALKCFHIPCVVENFPM
KARTVEELKELERVLQQKKIEAECLKLRKEIVEAQSGVKLIKQRHEEDDEEEEEEDKTVKYSNLPNYLLG
SLSTDFGVDTSLLSSQLELHSREEKINQIILLKDIIYKVKTVFNNEFDAAYKQKEFEIARVKERNVRIRE
IILDLELEEAVWQPEFEDCEKPERTLVVQDEEITAHKHIKPWHKAKELIVNHEKEHWLLIQDASTRLRAL
MDMMGGVLEVKKEDILRMVIPQPAFMAKPDAVWTEEERKQFKDYEKKVKELNEERDKYRKSLEAELKKLQ
NSIQESTQAFDEHLKRLFERRVKAEMVTNQEELKISNLAFSLLLDEELSSREKFLNNYLTRKQHEKSQTS
EAVRKSREDLDVCKEHYDNLLAEDKVMDRSFKKEFSEIPGHQVDILYKLFKRRPRISKQKTHSETTSVVP
FGELPGSGKLNKDAFAQLMKAMDELDNISNMPEGLDPLVWNHFCMTRRAKVENEQKVKQKAADLLEMATF
LQKRVEEEEKVQQEIERVFHELILLQEEKVRFQLNLTIQILLKQGQVELENFQLVLEYSDAILINKNIIE
DLNSVIRTQGQKKVASMMESKDVHKRILQIEWEHKKMEMEREDLNQKAWDIQMLFFSRDRQKYLNEPNYE
ALISIQIGIMEQTIAVLDKMHKKNVENCKKLLKKLGKFSNQKDIANYALSCNLREELVAVSERKDICNAM
GSKLTCEKIVKERYENMMQQQKLTNISKQQAEQISILQTEVERLRMKTFPALVQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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