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Report for CCDS1820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1820.1 Public Homo sapiens 2 CAMKMT 24 110 108 CCDS HistoryNCBI Gene:79823Re-query CCDS DB by CCDS ID:1820.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1820.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378494.8 ENSP00000367755.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378494.8Link to Ensembl Protein Viewer:ENSP00000367755.3Re-query CCDS DB by Nucleotide ID:ENST00000378494Re-query CCDS DB by Protein ID:ENSP00000367755
Original member Current member NCBI NM_024766.5 NP_079042.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024766.5Link to Protein Sequence:NP_079042.1Re-query CCDS DB by Nucleotide ID:NM_024766Re-query CCDS DB by Protein ID:NP_079042Link to BLAST:NP_079042.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079042.1 323 Q7Z624-1 323 100% 0 0

Chromosomal Locations for CCDS 1820.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 44362008 44362145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44372716 44372888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44390241 44390305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44704283 44704343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44706287 44706341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44707399 44707462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44715287 44715353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44743622 44743696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44754055 44754118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44766430 44766561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 44772036 44772113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGGAGTCGCGAGTCGCGGACGCTGGGACCGGCGAGACCGCGCGAGCAGCGGGCGGGAGTCCGGCAGTTG
GCTGCACCACTCGGGGGCCCGTAGTCTCGGCGCCCCTGGGAGCCGCCCGGTGGAAGCTCCTGCGGCAGGT
TCTGAAGCAAAAACACCTGGATGATTGCCTGCGACATGTATCTGTAAGAAGATTTGAATCATTTAATCTG
TTTTCAGTAACAGAAGGCAAAGAAAGGGAAACTGAAGAGGAGGTTGGTGCATGGGTCCAATATACAAGCA
TCTTCTGTCCTGAATACAGTATCTCCTTAAGGCATAATAGTGGATCCTTGAATGTTGAAGATGTCCTTAC
CAGCTTTGACAATACAGGAAATGTTTGCATCTGGCCATCTGAAGAGGTTTTGGCTTACTACTGCCTCAAG
CACAATAATATATTCAGGGCCCTTGCTGTGTGTGAGCTAGGGGGTGGCATGACATGCTTGGCTGGGCTCA
TGGTTGCTATTTCTGCAGATGTCAAAGAAGTTCTGTTAACTGATGGGAATGAAAAGGCCATCAGAAATGT
GCAAGACATCATCACAAGGAATCAGAAGGCTGGTGTGTTTAAGACCCAGAAAATATCAAGCTGCGTTTTA
CGATGGGATAATGAGACAGATGTCTCTCAACTGGAAGGACATTTTGACATTGTTATGTGTGCTGACTGCC
TGTTTCTGGACCAGTACAGAGCCAGCCTTGTTGATGCAATAAAGAGATTACTCCAGCCCAGGGGGAAAGC
GATGGTATTTGCCCCACGCCGAGGGAATACTTTAAACCAGTTTTGCAATCTAGCTGAAAAAGCTGGTTTC
TGTATCCAAAGACATGAAAATTATGATGAACACATTTCAAACTTCCACTCCAAGTTGAAAAAGGAAAACC
CGGACATATATGAAGAAAACCTTCATTACCCGCTTCTGCTTATTTTGACCAAACATGGATAG

Translation (323 aa):
MESRVADAGTGETARAAGGSPAVGCTTRGPVVSAPLGAARWKLLRQVLKQKHLDDCLRHVSVRRFESFNL
FSVTEGKERETEEEVGAWVQYTSIFCPEYSISLRHNSGSLNVEDVLTSFDNTGNVCIWPSEEVLAYYCLK
HNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRNVQDIITRNQKAGVFKTQKISSCVL
RWDNETDVSQLEGHFDIVMCADCLFLDQYRASLVDAIKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGF
CIQRHENYDEHISNFHSKLKKENPDIYEENLHYPLLLILTKHG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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