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Report for CCDS10833.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10833.3 Public Homo sapiens 16 ELMO3 24 110 108 CCDS HistoryNCBI Gene:79767Re-query CCDS DB by CCDS ID:10833.3See the combined annotation on chromosome 16 in Sequence Viewer

Public Note for CCDS 10833.2
The coding region has been updated to shorten the N-terminus to one that is more supported by conservation.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 10833.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393997.8 ENSP00000377566.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393997.8Link to Ensembl Protein Viewer:ENSP00000377566.3Re-query CCDS DB by Nucleotide ID:ENST00000393997Re-query CCDS DB by Protein ID:ENSP00000377566
Original member Current member NCBI NM_024712.5 NP_078988.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024712.5Link to Protein Sequence:NP_078988.3Re-query CCDS DB by Nucleotide ID:NM_024712Re-query CCDS DB by Protein ID:NP_078988Link to BLAST:NP_078988.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078988.3 720 Q96BJ8-1 720 100% 0 0

Chromosomal Locations for CCDS 10833.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67199327 67199404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67199553 67199593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67199684 67199756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67199951 67200001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67200192 67200361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67200451 67200550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67200657 67200808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67200890 67200968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67201385 67201435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67201520 67201642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67201742 67201873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67201977 67202078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67202176 67202284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67202397 67202533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67202627 67202790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67202892 67203004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67203119 67203223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67203327 67203409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67203497 67203583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67203665 67203877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2163 nt):
ATGGCGCCTCCGCGGAACGTGGTGAAGATTGCCATCAAGATGCGTGACGCCATCCCGCAGCTCATCCAGC
TGGACCAGGCGAAGCCCCTGGCCGCTGTGCTGAAGGAGGTGTGCGACGCGTGGAGCCTGACGCACTCTGA
GCGTTACGCCCTGCAGTTTGCGGATGGGCACCGGAGATACATCACCGAGAATAACCGCGCGGAGATCAAG
AATGGCAGCATCCTGTGCCTCAGCACGGCCCCAGACCTTGAGGCTGAGCAGCTCTTGGGTGGGCTGCAGA
GTAACAGTCCTGAAGGGCGCCGGGAAGCCCTGAGGCGCCTTGTTCCGCTGGCCTCGGACATGATCTTTGC
CAGGGAGGTCATCAGCCGTAATGGGCTCCAGATACTAGGCACCATCATTGAAGATGGGGACGACCTAGGA
GAGGTGCTGGCCCTCAGCCTGAGGGCCTTCTCAGAGCTCATGGAGCACGGCGTGGTGTCCTGGGAGACTC
TGAGCATCCCCTTTGTGAGGAAGGTGGTGTGCTACGTGAACATGAACCTCATGGATGCCTCCGTGCCTCC
CCTGGCCCTTGGGCTGCTGGAGAGTGTGACCTTGAGCAGCCCAGCCCTGGGCCAGCTGGTCAAGAGCGAG
GTGCCCCTGGATAGGCTGCTGGTGCACCTACAGGTGATGAACCAGCAGCTGCAAACCAAGGCCATGGCCC
TGCTGACAGCCTTGCTGCAGGGGGCCAGCCCTGTGGAACGCAAGCACATGCTTGACTATCTTTGGCAGAG
GAACCTTCGCCAGTTCATCTATAAGAACATCATCCACAGTGCAGCACCAATGGGCGACGAGATGGCTCAT
CACCTGTACGTACTGCAGGCTCTCATGCTGGGGCTGCTGGAGCCGCGCATGCGGACGCCCCTGGACCCCT
ACAGCCAGGAGCAGCGGGAGCAGCTGCAGGTCCTACGCCAGGCTGCCTTCGAGGTGGAGGGGGAGTCCTC
GGGTGCCGGGCTAAGTGCTGACCGTCGCCGTTCCCTCTGTGCCCGAGAGTTCCGCAAACTGGGCTTTTCT
AACAGCAACCCAGCACAGGACCTGGAGCGCGTGCCCCCCGGTCTGCTGGCCCTGGACAACATGTTGTACT
TCTCCAGAAACGCGCCCAGCGCGTACAGCCGGTTTGTGTTGGAGAACAGCAGCCGCGAGGACAAGCACGA
GTGCCCCTTTGCCCGGGGCAGCATCCAGCTGACGGTGCTGCTGTGTGAGCTGCTCCGTGTTGGGGAGCCC
TGCTCTGAGACAGCCCAGGACTTCTCACCCATGTTCTTCGGCCAAGACCAGAGCTTCCACGAGCTCTTCT
GTGTGGGCATCCAGCTGTTGAATAAGACCTGGAAGGAGATGCGGGCTACACAGGAGGACTTCGACAAGGT
CATGCAGGTGGTGCGGGAGCAGCTGGCCCGCACTCTGGCCCTGAAGCCCACTTCCCTGGAGCTCTTCCGA
ACCAAGGTGAATGCGCTCACTTATGGGGAGGTGCTGCGGCTGCGGCAGACTGAACGGCTGCACCAGGAGG
GCACACTGGCTCCCCCTATACTGGAGCTGCGGGAGAAGCTGAAGCCAGAGCTCATGGGCCTGATCCGCCA
GCAGCGCTTGCTCCGCCTCTGTGAGGGGACGCTCTTCCGCAAGATCAGCAGCCGGCGGCGCCAGGATAAG
CTGTGGTTCTGCTGCCTGTCCCCCAACCACAAGCTGCTGCAGTACGGAGACATGGAGGAGGGCGCCAGCC
CGCCTACCCTGGAGAGTCTGCCCGAGCAACTCCCTGTGGCCGACATGAGGGCACTCCTGACAGGCAAGGA
CTGCCCCCATGTCCGGGAGAAGGGCTCCGGGAAGCAGAACAAGGACCTCTATGAGTTGGCCTTCTCAATC
AGCTATGACCGTGGGGAGGAGGAAGCGTACCTCAACTTCATTGCCCCCTCCAAGCGGGAGTTCTACCTGT
GGACAGATGGGCTCAGTGCCTTGCTGGGCAGTCCCATGGGCAGCGAGCAGACACGGCTGGACCTGGAGCA
GCTGCTGACCATGGAGACCAAGCTGCGTCTGCTGGAGCTGGAGAACGTGCCCATCCCCGAGCGGCCACCC
CCTGTGCCCCCACCCCCCACCAACTTCAACTTCTGCTATGACTGCAGCATCGCTGAACCTTGA

Translation (720 aa):
MAPPRNVVKIAIKMRDAIPQLIQLDQAKPLAAVLKEVCDAWSLTHSERYALQFADGHRRYITENNRAEIK
NGSILCLSTAPDLEAEQLLGGLQSNSPEGRREALRRLVPLASDMIFAREVISRNGLQILGTIIEDGDDLG
EVLALSLRAFSELMEHGVVSWETLSIPFVRKVVCYVNMNLMDASVPPLALGLLESVTLSSPALGQLVKSE
VPLDRLLVHLQVMNQQLQTKAMALLTALLQGASPVERKHMLDYLWQRNLRQFIYKNIIHSAAPMGDEMAH
HLYVLQALMLGLLEPRMRTPLDPYSQEQREQLQVLRQAAFEVEGESSGAGLSADRRRSLCAREFRKLGFS
NSNPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARGSIQLTVLLCELLRVGEP
CSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDFDKVMQVVREQLARTLALKPTSLELFR
TKVNALTYGEVLRLRQTERLHQEGTLAPPILELREKLKPELMGLIRQQRLLRLCEGTLFRKISSRRRQDK
LWFCCLSPNHKLLQYGDMEEGASPPTLESLPEQLPVADMRALLTGKDCPHVREKGSGKQNKDLYELAFSI
SYDRGEEEAYLNFIAPSKREFYLWTDGLSALLGSPMGSEQTRLDLEQLLTMETKLRLLELENVPIPERPP
PVPPPPTNFNFCYDCSIAEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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