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Report for CCDS28503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28503.1 Public Mus musculus 17 Nme3 23 108 98 CCDS HistoryNCBI Gene:79059Re-query CCDS DB by CCDS ID:28503.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28503.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024978.6 ENSMUSP00000024978.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024978.6Link to Ensembl Protein Viewer:ENSMUSP00000024978.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000024978Re-query CCDS DB by Protein ID:ENSMUSP00000024978
Original member Current member NCBI NM_019730.2 NP_062704.2 Accepted alive Link to Nucleotide Sequence:NM_019730.2Link to Protein Sequence:NP_062704.2Re-query CCDS DB by Nucleotide ID:NM_019730Re-query CCDS DB by Protein ID:NP_062704Link to BLAST:NP_062704.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062704.2 169 Q9WV85 169 100% 0 0

Chromosomal Locations for CCDS 28503.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 24896514 24896559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 24896628 24896758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 24896852 24896953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 24897028 24897140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 24897214 24897331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (510 nt):
ATGATCTGTCTGGTGCTGACCATCTTTGCTAACCTCTTCCCCTCAGCCTACAGCGGCGTGAACGAGCGCA
CGTTCTTGGCAGTGAAGCCCGACGGCGTGCAGCGGCGGCTGGTGGGCGAGATCGTGCGTCGCTTTGAGAG
GAAGGGCTTCAAGCTGGTGGCACTGAAGCTAGTGCAGGCCTCCGAAGAGCTACTGCGGGAGCATTATGTC
GAGCTGCGCGAGAAACCCTTCTACAGCCGACTGGTTAAATACATGAGTTCTGGCCCCGTGGTGGCCATGG
TGTGGCAAGGGCTGGATGTCGTGCATGCTTCGCGAGCCCTCATAGGGGCCACTGACCCAGGGGACGCCAT
GCCCGGTACGATCCGTGGGGATTTCTGCATGGAGGTTGGCAAGAATGTAATTCATGGCAGCGACTCGGTG
GAAAGTGCTCACAGAGAAATCGCTCTTTGGTTCCGTGAGGCCGAGCTTCTGTGCTGGGAGGACAGCGCCG
GACATTGGCTATATGAGTAG

Translation (169 aa):
MICLVLTIFANLFPSAYSGVNERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYV
ELREKPFYSRLVKYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGKNVIHGSDSV
ESAHREIALWFREAELLCWEDSAGHWLYE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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