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Report for CCDS37060.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37060.1 Public Mus musculus 15 Fbxo43 23 108 98 CCDS HistoryNCBI Gene:78803Re-query CCDS DB by CCDS ID:37060.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37060.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058643.3 ENSMUSP00000054125.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058643.3Link to Ensembl Protein Viewer:ENSMUSP00000054125.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000058643Re-query CCDS DB by Protein ID:ENSMUSP00000054125
Original member Current member NCBI NM_001081253.2 NP_001074722.1 Accepted alive Link to Nucleotide Sequence:NM_001081253.2Link to Protein Sequence:NP_001074722.1Re-query CCDS DB by Nucleotide ID:NM_001081253Re-query CCDS DB by Protein ID:NP_001074722Link to BLAST:NP_001074722.1

Chromosomal Locations for CCDS 37060.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 36151644 36151892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36151985 36152185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36157935 36158037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36161687 36163059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1926 nt):
ATGGACTCCTCTGCTGTCACTGTCAAGGGTCTCAGCCTCATAGACTTTTGTTCCACATCCTCCTTTAAAT
ATAGGGGCCATCACGAGCTGTCAGAATCTTGCAGCCTTAATAAGAAAGAAGAAGAGCCTATGCTAACCTG
TGAGCATCCTGAAACTCCAAGTTTAGGTTCCCCCAATTCTGCAGTATCTCCCAGTCAAATAATGAAGTCT
GTGTCCCTAAGGAAGGAAAAGGATAAAAGCCCAGAACTTTGTGAGACTCCTAAACTCAGAAGGAAAAAAT
GCACATTACGCAGGCGGCTAGACTTTTCTTTCCCTCTTCTGAAGGGGGATTCTGATTCACAAAGCAGATC
TCTGGAAAGTAACATAAGCCAAGGTGTTAGCCTAGAAAAACATTTGCCAGGTAGCACTTCAGGTTTCCCA
AAGGAAGACAACTTTAGCCCATTAGTTACCAGCACGATAAAAACAGAGGATGTGGTTTCCAACAGTCAGA
ACTCAAGGTTACATTTTTCTCAGCACAAGACTTCCACCATTGAAGATTCCAAAGACAACTGTGGCTTGTT
TGAAGTGGAATGTCTGTCTCCAATTGAAGGCAATGATTTTAAAGATTCTATCACACACTTTAGTGACAGC
AGTTTAAGTGTTAGTGATGAGAATACATGTCCTGAACTTCTGGGCTCCTGTGGTAGCCAAACAACCTATG
GAGCAGATGTGACTACATCTGTAACTCCAGTAAGTAGTCTCATAGCAAAAATCAAATTTAATGGAAACCA
AACTCTTGATTCTTCAGGAGAGGTGAGAGACAGTCTTTTTACACCTGAAGACAGTGGCTTTTGCTCACTT
AGCTGGGACAAATCAGAAGATTTCCTCTCTGACCAAGAGGGCTCTTTTCAAGAACTGCTTCAAAAACACA
GGGTGACTCCCAAAGTTGGGGACCAGGTAAAAAAGCCAAAGCATTTTGGGAGGTTGAGAAGACTGTCCAC
TCTCCAGGAGCAAGGCTCCCAGTCAGAGGATGAAATGCAGACGGTCCATCCTAACTCTGATTCAGGTGTC
TTGGAGAGTCTGCAAGGCTCTGAGGAGAAGCGTGGGAACTTGGCTTTAAGCTTTAAGGACTTATCAAATA
CTCCAGCCCTGCAGTTGGTGCAGGAGCTCTTTATGAAAAGCAAAAGGAAACGATCTCAGCAGGAAGATGA
CCAGGAATTCTTTGAGGACAGGGACGAGGGGAAAATTGCCAGACTGCAGCGTGTTCTCGCAGGACTGATT
GGCAAGAAGATGGGCATAGAACAGCTGGATATCCTGACCGAATTACAGTATAGAAACTTGAAGCACATCC
TAGCTATGGTTTTAGAGTCCTTGACTTCGGAGAGTTTATACAGTGCTTGGAACGTCAGCAGAAACTGGCG
TGAAATTGTGGCTCAGGATAAAAAGGCAAACAGGAGGAGGAAACTTTATATCATACAGCTGAGAGCAAGT
GCTCAGGGGGCCGCTGTGTTACGTGTTCAGGATGCTGCCACTCGGCTCTGCCTTCTGAGTCGCTTGGCCT
TAAGATCAGTGCAGGCACAGGCACAGGCACCCAGTGGTGAGCAGGTTCCAACTCTGTCCCCTTGGGGGGA
TGTTCTGACACCTGTAGCAAGCTCTTCCCTCACCCACCTACGGAGTAAACAGGAACAGTATGTGAAGGTT
GCCAGGACACTGTTTACTGATGAAGCTTTAAAGCCTTGCCCGAGGTGCCAATCCCCTGCTAAGTACCAGC
CGCACAAGAAAAGGGGGCTATGCAGCCGCCTGGCCTGCGGCTTTGACTTCTGTGTGTTATGTCTGTGCGC
TTATCACGGGTCTGAAGACTGTAGAAGAGGGTCAGCAAAGGCGAGAGGTAGCAAAGATGTTCTCCCAGGG
AGTGCCCAAAGCAAGCGGAACTTAAAACGCCTCTGA

Translation (641 aa):
MDSSAVTVKGLSLIDFCSTSSFKYRGHHELSESCSLNKKEEEPMLTCEHPETPSLGSPNSAVSPSQIMKS
VSLRKEKDKSPELCETPKLRRKKCTLRRRLDFSFPLLKGDSDSQSRSLESNISQGVSLEKHLPGSTSGFP
KEDNFSPLVTSTIKTEDVVSNSQNSRLHFSQHKTSTIEDSKDNCGLFEVECLSPIEGNDFKDSITHFSDS
SLSVSDENTCPELLGSCGSQTTYGADVTTSVTPVSSLIAKIKFNGNQTLDSSGEVRDSLFTPEDSGFCSL
SWDKSEDFLSDQEGSFQELLQKHRVTPKVGDQVKKPKHFGRLRRLSTLQEQGSQSEDEMQTVHPNSDSGV
LESLQGSEEKRGNLALSFKDLSNTPALQLVQELFMKSKRKRSQQEDDQEFFEDRDEGKIARLQRVLAGLI
GKKMGIEQLDILTELQYRNLKHILAMVLESLTSESLYSAWNVSRNWREIVAQDKKANRRRKLYIIQLRAS
AQGAAVLRVQDAATRLCLLSRLALRSVQAQAQAPSGEQVPTLSPWGDVLTPVASSSLTHLRSKQEQYVKV
ARTLFTDEALKPCPRCQSPAKYQPHKKRGLCSRLACGFDFCVLCLCAYHGSEDCRRGSAKARGSKDVLPG
SAQSKRNLKRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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