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Report for CCDS26575.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26575.1 Public Mus musculus 13 Naa35 23 108 98 CCDS HistoryNCBI Gene:78689Re-query CCDS DB by CCDS ID:26575.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26575.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022038.14 ENSMUSP00000022038.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022038.14Link to Ensembl Protein Viewer:ENSMUSP00000022038.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022038Re-query CCDS DB by Protein ID:ENSMUSP00000022038
Original member Current member NCBI NM_030153.2 NP_084429.2 Accepted alive Link to Nucleotide Sequence:NM_030153.2Link to Protein Sequence:NP_084429.2Re-query CCDS DB by Nucleotide ID:NM_030153Re-query CCDS DB by Protein ID:NP_084429Link to BLAST:NP_084429.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084429.2 725 Q6PHQ8 725 100% 0 0

Chromosomal Locations for CCDS 26575.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 59586158 59586281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59595349 59595382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59598040 59598154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59599729 59599803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59600904 59601071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59607246 59607312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59607388 59607431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59608145 59608195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59608761 59608844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59609479 59609593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59612637 59612815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59616744 59616803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59617920 59618026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59622866 59622932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59624505 59624603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59625419 59625597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59627878 59628014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59628918 59628985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59630000 59630140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59630581 59630703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59632948 59633028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59634418 59634477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2178 nt):
ATGGTTATGAAAGCTACTGTAGACGACGATGCTTCGGGATGGGAGCTCGGGGTCCCGGAAAAAATGGAAA
AAAGTAGCACAAGCTGGGTGGACATAACCCAGGATTTTGAAGATGCTTGTCGAGAGCTGAAGTTGGGAGA
ACTGCTTCATGATAAGCTGTTTGGTCTTTTTGAAGCCATGTCTGCTATTGAAATGATGGATCCTAAGATG
GATGCCGGTATGATCGGGAACCAAGTGAATAGAAAAGTTCTCAATTTTGAACAAGCTATCAAGGATGGCA
CCATTAAAATTAAAGACCTCAGCCTGCCTGAACTGATAGGAATAATGGACACCTGTTTCTGCTGTTTGAT
CACATGGCTCGAAGGCCATTCCTTGGCACAGACAGTGTTTACGTGCCTTTACATTCATAATCCCGACTTC
ATAGAAGATCCTGCCATGAAAGCTTTTGCTCTGGGAATCTTGAAGATCTGCGACATTGCACGGGAAAAAG
TAAATAAAGCTGCTGTTTTCGAAGAGGAAGATTTCCAGTCAATGACATACGGATTTAAAATGGCCAACAG
TGTGACAGATCTCCGAGTTACAGGGATGCTAAAGGATGTGGAAGATGATCTGCAAAGGCGAGTAAAGAGT
ACTCGAAGTCGACAAGGAGAAGAGAGAGATCCAGAGGTCGAACTAGAACACCAGCAGTGCTTGGCAGCAT
TCAGCAGAGTGAAGTTCACGCGAGTGCTGCTCACAGTGCTCATAGCCTTTACTAAGAAAGAGACCAGTGC
TGTTGCAGAGGCTCAGAAACTGATGGTCCAGGCGGCAGACCTTCTTTCTGCCATTCACACCTCATTGCAC
CACGGCATCCAGGCTCAGAATGGCACTACCAAAGGAGACCATCCAATTATGATGGGTTTTGAGCCCCTTG
TTAACCAGAGATTACTTCCACCCACCTTCCCTCGCTATGCAAAAATAATTAAAAGAGAAGAAATGGTCAA
CTATTTCTCAAGATTAATAGACAGAATAAAAACTGTCTGTGAAGTCGTGAACTTACCAAACTTACACTGT
ATCCTGGATTTTTTCTGTGAATTTAGTGAGCAGTCACCATGTGTTCTTTCAAGATCTCTGTTACAAACCA
CTTTCCTCGTGGATAACAAAAAGGTCTTTGGCACTCATCTCATGCAAGACATGGTGAAAGATGCTCTGCG
GTCCTTCGTCAGTCCTCCGGTGCTCTCCCCCAAGTGTTGCCTATATAATAATCACCAGGCTAAGGACTGT
ATCGACTCCTTTGTTACTCACTGTGTTCGGCCGTTTTGTAGTCTTGTTCAGATCCATGGCCATAACAGGG
CTCGGCAGAGAGACAAGCTTGGTCACATTCTTGAGGAGTTTGCTACCTTGCAAGATGAGGCAGAGAAGGT
TGATGCAGCGCTTCATACTATGTTGTTGAAACAGGAGCCTCAGAGACAACATCTGGCCTGCTTAGGAACC
TGGGTTCTTTACCATAACCTCCGGATTATGATCCAGTATCTGCTCAGTGGCTTTGAGCTGGAGCTGTACA
GCATGCATGAGTACTACTACATCTACTGGTACCTCTCCGAGTTCCTGTATGCATGGCTGATGTCAACCCT
GAGCCGCGCTGACGGCTCTCAGATGGCAGAGGAGAGGATCATGGAGGAACAGCAGAAAGGCCGCAGCAGC
AAAAAAACAAAGAAGAAAAAGAAAGTTCGTCCGTTGAGCCGAGAGATCACAATGAGCCAGGCCTATCAGA
ACATGTGTGCTGGGATGTTCAAGACGATGGTCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTT
TGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAGGTTTGCACCGTTCAACAGTGTGATGACGCCGCCA
CCAGTGCACTACCTGCAGTTCAAGGAAATGTCTGACCTCAATAAATACAGCCCTCCTCCTCAGTCTCCAG
AGCTGTATGTGGCAGCTAGTAAGCACTTTCAGCAGGCAAAAATGATCCTTGAAAATATCCCCAATCCAGA
CCGTGAGGTCAGTAGAATCCTGAAGGTTGCCAAGCCCAACTTTGTGGTTATGAAGCTCTTAGCAGGAGGA
CACAAAAAAGAGTCAAAGGTTCCTCCCGAATTCGACTTCTCTGTTCACAAATATTTTCCTGTTGTGAAAC
TGGTTTGA

Translation (725 aa):
MVMKATVDDDASGWELGVPEKMEKSSTSWVDITQDFEDACRELKLGELLHDKLFGLFEAMSAIEMMDPKM
DAGMIGNQVNRKVLNFEQAIKDGTIKIKDLSLPELIGIMDTCFCCLITWLEGHSLAQTVFTCLYIHNPDF
IEDPAMKAFALGILKICDIAREKVNKAAVFEEEDFQSMTYGFKMANSVTDLRVTGMLKDVEDDLQRRVKS
TRSRQGEERDPEVELEHQQCLAAFSRVKFTRVLLTVLIAFTKKETSAVAEAQKLMVQAADLLSAIHTSLH
HGIQAQNGTTKGDHPIMMGFEPLVNQRLLPPTFPRYAKIIKREEMVNYFSRLIDRIKTVCEVVNLPNLHC
ILDFFCEFSEQSPCVLSRSLLQTTFLVDNKKVFGTHLMQDMVKDALRSFVSPPVLSPKCCLYNNHQAKDC
IDSFVTHCVRPFCSLVQIHGHNRARQRDKLGHILEEFATLQDEAEKVDAALHTMLLKQEPQRQHLACLGT
WVLYHNLRIMIQYLLSGFELELYSMHEYYYIYWYLSEFLYAWLMSTLSRADGSQMAEERIMEEQQKGRSS
KKTKKKKKVRPLSREITMSQAYQNMCAGMFKTMVAFDMDGKVRKPKFELDSEQVRYEHRFAPFNSVMTPP
PVHYLQFKEMSDLNKYSPPPQSPELYVAASKHFQQAKMILENIPNPDREVSRILKVAKPNFVVMKLLAGG
HKKESKVPPEFDFSVHKYFPVVKLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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