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Report for CCDS32831.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32831.1 Public Homo sapiens 18 C18orf32 24 110 108 CCDS HistoryNCBI Gene:497661Re-query CCDS DB by CCDS ID:32831.1Re-query CCDS DB by GeneID:497661See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32831.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318240.8 ENSP00000323199.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318240.8Link to Ensembl Protein Viewer:ENSP00000323199.3Re-query CCDS DB by Nucleotide ID:ENST00000318240Re-query CCDS DB by Protein ID:ENSP00000323199
Original member Current member EBI ENST00000582392.2 ENSP00000462538.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000582392.2Link to Ensembl Protein Viewer:ENSP00000462538.1Re-query CCDS DB by Nucleotide ID:ENST00000582392Re-query CCDS DB by Protein ID:ENSP00000462538
Original member Current member EBI ENST00000613385.4 ENSP00000480941.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613385.4Link to Ensembl Protein Viewer:ENSP00000480941.1Re-query CCDS DB by Nucleotide ID:ENST00000613385Re-query CCDS DB by Protein ID:ENSP00000480941
Original member Current member NCBI NM_001035005.4 NP_001030177.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001035005.4Link to Protein Sequence:NP_001030177.1Re-query CCDS DB by Nucleotide ID:NM_001035005Re-query CCDS DB by Protein ID:NP_001030177Link to BLAST:NP_001030177.1
Original member Current member NCBI NM_001199346.2 NP_001186275.1 Accepted alive Link to Nucleotide Sequence:NM_001199346.2Link to Protein Sequence:NP_001186275.1Re-query CCDS DB by Nucleotide ID:NM_001199346Re-query CCDS DB by Protein ID:NP_001186275Link to BLAST:NP_001186275.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001030177.1 76 Q8TCD1 76 100% 0 0
NP_001186275.1 76 Q8TCD1 76 100% 0 0

Chromosomal Locations for CCDS 32831.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 49482345 49482410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 49483584 49483748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (231 nt):
ATGGTGTGCATTCCTTGTATCGTCATTCCAGTTCTGCTCTGGATCTACAAAAAATTCCTGGAGCCATATA
TATACCCTCTGGTTTCCCCCTTCGTTAGTCGTATATGGCCTAAGAAAGCAATACAAGAATCCAATGATAC
AAACAAAGGCAAAGTAAACTTTAAGGGTGCAGACATGAATGGATTACCAACAAAAGGACCAACAGAAATC
TGTGATAAAAAGAAAGACTAA

Translation (76 aa):
MVCIPCIVIPVLLWIYKKFLEPYIYPLVSPFVSRIWPKKAIQESNDTNKGKVNFKGADMNGLPTKGPTEI
CDKKKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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