NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92749.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92749.1 Public Homo sapiens 2 CALM2 24 110 108 CCDS HistoryNCBI Gene:805Re-query CCDS DB by CCDS ID:92749.1Re-query CCDS DB by GeneID:805See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92749.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000456319.6 ENSP00000411440.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456319.6Link to Ensembl Protein Viewer:ENSP00000411440.2Re-query CCDS DB by Nucleotide ID:ENST00000456319Re-query CCDS DB by Protein ID:ENSP00000411440
Original member Current member EBI ENST00000655450.1 ENSP00000499266.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000655450.1Link to Ensembl Protein Viewer:ENSP00000499266.1Re-query CCDS DB by Nucleotide ID:ENST00000655450Re-query CCDS DB by Protein ID:ENSP00000499266
Original member Current member EBI ENST00000656538.1 ENSP00000499357.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000656538.1Link to Ensembl Protein Viewer:ENSP00000499357.1Re-query CCDS DB by Nucleotide ID:ENST00000656538Re-query CCDS DB by Protein ID:ENSP00000499357
Original member Current member EBI ENST00000655728.1 ENSP00000499656.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000655728.1Link to Ensembl Protein Viewer:ENSP00000499656.1Re-query CCDS DB by Nucleotide ID:ENST00000655728Re-query CCDS DB by Protein ID:ENSP00000499656
Original member Current member EBI ENST00000668667.1 ENSP00000499706.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000668667.1Link to Ensembl Protein Viewer:ENSP00000499706.1Re-query CCDS DB by Nucleotide ID:ENST00000668667Re-query CCDS DB by Protein ID:ENSP00000499706
Original member Current member NCBI NM_001305625.2 NP_001292554.1 Accepted alive Link to Nucleotide Sequence:NM_001305625.2Link to Protein Sequence:NP_001292554.1Re-query CCDS DB by Nucleotide ID:NM_001305625Re-query CCDS DB by Protein ID:NP_001292554Link to BLAST:NP_001292554.1
Original member Current member NCBI NM_001305626.1 NP_001292555.1 Accepted alive Link to Nucleotide Sequence:NM_001305626.1Link to Protein Sequence:NP_001292555.1Re-query CCDS DB by Nucleotide ID:NM_001305626Re-query CCDS DB by Protein ID:NP_001292555Link to BLAST:NP_001292555.1

Chromosomal Locations for CCDS 92749.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 47160776 47160804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47161723 47161858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47162286 47162392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47162519 47162588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (342 nt):
ATGAGATCTCTTGGGCAGAATCCCACAGAAGCAGAGTTACAGGACATGATTAATGAAGTAGATGCTGATG
GTAATGGCACAATTGACTTCCCTGAATTTCTGACAATGATGGCAAGAAAAATGAAAGACACAGACAGTGA
AGAAGAAATTAGAGAAGCATTCCGTGTGTTTGATAAGGATGGCAATGGCTATATTAGTGCTGCAGAACTT
CGCCATGTGATGACAAACCTTGGAGAGAAGTTAACAGATGAAGAAGTTGATGAAATGATCAGGGAAGCAG
ATATTGATGGTGATGGTCAAGTAAACTATGAAGAGTTTGTACAAATGATGACAGCAAAGTGA

Translation (113 aa):
MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL
RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH