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Report for CCDS5058.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5058.1 Public Homo sapiens 6 MTRES1 24 110 108 CCDS HistoryNCBI Gene:51250Re-query CCDS DB by CCDS ID:5058.1Re-query CCDS DB by GeneID:51250See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5058.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311381.8 ENSP00000310951.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311381.8Link to Ensembl Protein Viewer:ENSP00000310951.5Re-query CCDS DB by Nucleotide ID:ENST00000311381Re-query CCDS DB by Protein ID:ENSP00000310951
Original member Current member EBI ENST00000405204.6 ENSP00000384867.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405204.6Link to Ensembl Protein Viewer:ENSP00000384867.2Re-query CCDS DB by Nucleotide ID:ENST00000405204Re-query CCDS DB by Protein ID:ENSP00000384867
Original member Current member NCBI NM_001142468.3 NP_001135940.1 Accepted alive Link to Nucleotide Sequence:NM_001142468.3Link to Protein Sequence:NP_001135940.1Re-query CCDS DB by Nucleotide ID:NM_001142468Re-query CCDS DB by Protein ID:NP_001135940Link to BLAST:NP_001135940.1
Original member Current member NCBI NM_016487.5 NP_057571.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016487.5Link to Protein Sequence:NP_057571.1Re-query CCDS DB by Nucleotide ID:NM_016487Re-query CCDS DB by Protein ID:NP_057571Link to BLAST:NP_057571.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135940.1 240 Q9P0P8 240 100% 0 0
NP_057571.1 240 Q9P0P8 240 100% 0 0

Chromosomal Locations for CCDS 5058.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 107039761 107040230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 107044260 107044332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 107051057 107051236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (723 nt):
ATGGCTATGGCTAGTGTTAAATTGCTTGCCGGTGTTTTAAGAAAGCCAGATGCCTGGATTGGACTCTGGG
GTGTTCTCCGAGGGACACCTTCATCATACAAACTCTGTACTTCCTGGAATCGATACTTGTATTTTTCTAG
TACCAAGTTACGTGCACCAAATTATAAAACACTTTTTTATAATATTTTCTCACTGAGACTCCCAGGGCTT
TTACTATCTCCAGAATGTATTTTTCCTTTTTCCGTAAGACTCAAAAGTAATATAAGGTCTACAAAATCTA
CTAAAAAGTCTCTGCAAAAAGTAGATGAAGAGGACTCTGATGAAGAAAGCCATCATGATGAGATGAGTGA
GCAGGAAGAGGAGCTTGAGGATGATCCTACTGTAGTCAAAAACTATAAAGACCTGGAAAAAGCAGTTCAG
TCTTTTCGGTATGATGTTGTCCTGAAGACGGGGCTAGATATTGGGAGAAACAAAGTGGAAGATGCTTTCT
ACAAAGGTGAACTCAGGCTGAATGAGGAAAAATTATGGAAGAAAAGCAGAACGGTGAAAGTGGGAGATAC
ATTGGATCTTCTCATTGGAGAGGATAAAGAAGCAGGAACAGAGACAGTTATGCGGATTCTCTTGAAAAAA
GTGTTTGAAGAGAAGACTGAAAGTGAAAAATACAGAGTGGTGTTACGGCGGTGGAAAAGTTTAAAGTTGC
CTAAGAAGAGAATGTCTAAATAA

Translation (240 aa):
MAMASVKLLAGVLRKPDAWIGLWGVLRGTPSSYKLCTSWNRYLYFSSTKLRAPNYKTLFYNIFSLRLPGL
LLSPECIFPFSVRLKSNIRSTKSTKKSLQKVDEEDSDEESHHDEMSEQEEELEDDPTVVKNYKDLEKAVQ
SFRYDVVLKTGLDIGRNKVEDAFYKGELRLNEEKLWKKSRTVKVGDTLDLLIGEDKEAGTETVMRILLKK
VFEEKTESEKYRVVLRRWKSLKLPKKRMSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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