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Report for CCDS48845.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48845.1 Public Mus musculus 11 Zfp735 23 108 98 CCDS HistoryNCBI Gene:76390Re-query CCDS DB by CCDS ID:48845.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48845.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080407.5 ENSMUSP00000079269.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080407.5Link to Ensembl Protein Viewer:ENSMUSP00000079269.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000080407Re-query CCDS DB by Protein ID:ENSMUSP00000079269
Original member Current member NCBI NM_001126489.2 NP_001119961.1 Accepted alive Link to Nucleotide Sequence:NM_001126489.2Link to Protein Sequence:NP_001119961.1Re-query CCDS DB by Nucleotide ID:NM_001126489Re-query CCDS DB by Protein ID:NP_001119961Link to BLAST:NP_001119961.1

Chromosomal Locations for CCDS 48845.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 73688957 73688971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73689692 73689818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73690281 73690376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73710470 73712436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2205 nt):
ATGTGTGCTTCACAGGGTGTATTGACATTCATGGATGTGGCTATAGAGTTCTCTAAGGAAGAGTGGGAAT
GTCTGGATTCTGCCAAGAGGGCTTTGTACAGAGATGTCATGTTGGAAAATTACATCAACCTGGTTTCTGT
GGGTGTTGCTGTTTCAAAACAAGAGGTAATCATCTGTCTTGAACAAAACAAAGAACCATGGATTGTTGAT
GGAGAGAAGACAGAAGTAAGAGAACCAGCATTGGATTGCAATCGTACCAAGAAGCTATTACCAAAGGTGT
GTACACAAAATTATTTTCAGAAAGAAATAACACCAAGATTTGGACTTAATGGTCTTTTTGACCTATATAG
AAAGAAGTTCTGGGAATATAGAGCTGGCAGTGAAGAGCATGAAATATGTAATTATGAAAATGATTTGCTC
CCATTTTTACAGTTGGATGCTTCTTTAGGAAAATTTTTACAACAACTTTTGAAATGCAACTCTGTACAGA
GAAATACAAAAACATTAAAGAGAGACATTTGGGTGAATAAACACACTTCTCTGAAGCATTTACTAAGTAG
TATGGTATTAGACAATACATCAACACTTTATGAAGAAAGGAGATTTTGGAGAAGAGAAAAAATTACTGAA
TATCATCAATGTGAAAGATATTTCTCTAAAAGTTTATTACATCTCCCTCAACCATTAAATCGAGTTTATG
ACAAGTTCTACCATTTAGATCAACATAAGAAAGTATCTACATATGCAGTGAAACTTGGAATATATCACAT
GGGAAGCAGTTGTGGGAACTCCAACAGAGTAAATGATAATAACATAGGCTACATTAAAAACCCCTTTCTG
AAGTATTACCAAAACAATCAACTTGGAGGGATTTTATACCAAGGTAATAACATATTATATGATTCTCATC
ATGAAACAATTCTAAGTAAAAATGTGATAAGTAAACCTATTTTAGAAAATTATTATAACCATGATAGTAG
ACAGGCTAGGTCTAATCACTGCTCTCAGTCAATTTTGCAACAGCAGGACCATACCACAGAGAACCTTTAT
GACATTTTAAAAGAATCCTTAACTCTTCAGCTTTATAACAGAACATGGACTAAAGGAGATACCAACAGAT
ACACATGTGATATATACAGGAATGCCTTAATTGAATCATTATACTTAGAGAGAGATAACATAAAACATAT
TAAAAAACTTTTCCTGGCCCCGGGATATGATAAGTCCTTGAATTTCAATTCCAATATCATTCAATATGAT
TCAAACCATAATGAAAAGGGAATTCAGAATGCCAGAGTACATATATACAGTTTTTCCAATGTGTCAAATC
TCTTGGGACATTCAAACTTATCAGTTGAAGAAAAACACTCAAAATATAAACCACCAGGGAAATGTTCCAG
TAAACCCTCAGGCCTTATGGTATTTGAAACTAGAGGAAAATCATGGAAATCATGTATGCAATGTGGCAAG
TGCTTTGCTCAGTACTCAGCTCTTCAAAACCCTCACAGAATCCATACTGTAAAGAAACCTTTCAGTTGTA
AGGACTGTTTGAAATTATTTACTTGGTCTTCAAAACTTCAAGCTCACCACAGAATACACACTGCACAGGA
ACTTTATAAATCTAATAAGTGTGGGGAATCATTTATGCAGTCATCAAATCTTCTAGCTCACCAAAGAATC
CATACAGGAGATAAACCTTACAAATGTAATAAATGTGGTAAATATTTTACCCGGTCTTCAAATCTTCAAG
TGCATCAGAGAGTCCACACAGGAGACAAACCTTATGAATGTAATAAATGTGGGAAATCATTCACACAGTC
CTCAAGTCTTAAAATTCATCACAGAATCCATACAGGTGACAAACCTTACAGATGTAATGAATGTGGTAAA
TGTTTTATTCGGTCTTCAAATCTTAAAGTTCATCAGAGAGTACACACAGGAGACAAACCTTACAAATGTA
ATGAATGTGGGAAATCATTCACACAGTCCTCAAGTCTTAAAGTTCACCACAAAATCCATACAGGAGATAA
ACCTTACAAATGTAATGAATGTGGGAAAAGCTTTATACAGTCCTCAGATCTTAAAAATCACTACAGAATC
CACACTGGAGACAAACCTTACAAGTGTAATGAATGTGGGAAAAGCTTTAGACAGTGCTCAGATCTTAAAA
ATCACTACAGAATCCATAGTGGAGACAAACCTTAA

Translation (734 aa):
MCASQGVLTFMDVAIEFSKEEWECLDSAKRALYRDVMLENYINLVSVGVAVSKQEVIICLEQNKEPWIVD
GEKTEVREPALDCNRTKKLLPKVCTQNYFQKEITPRFGLNGLFDLYRKKFWEYRAGSEEHEICNYENDLL
PFLQLDASLGKFLQQLLKCNSVQRNTKTLKRDIWVNKHTSLKHLLSSMVLDNTSTLYEERRFWRREKITE
YHQCERYFSKSLLHLPQPLNRVYDKFYHLDQHKKVSTYAVKLGIYHMGSSCGNSNRVNDNNIGYIKNPFL
KYYQNNQLGGILYQGNNILYDSHHETILSKNVISKPILENYYNHDSRQARSNHCSQSILQQQDHTTENLY
DILKESLTLQLYNRTWTKGDTNRYTCDIYRNALIESLYLERDNIKHIKKLFLAPGYDKSLNFNSNIIQYD
SNHNEKGIQNARVHIYSFSNVSNLLGHSNLSVEEKHSKYKPPGKCSSKPSGLMVFETRGKSWKSCMQCGK
CFAQYSALQNPHRIHTVKKPFSCKDCLKLFTWSSKLQAHHRIHTAQELYKSNKCGESFMQSSNLLAHQRI
HTGDKPYKCNKCGKYFTRSSNLQVHQRVHTGDKPYECNKCGKSFTQSSSLKIHHRIHTGDKPYRCNECGK
CFIRSSNLKVHQRVHTGDKPYKCNECGKSFTQSSSLKVHHKIHTGDKPYKCNECGKSFIQSSDLKNHYRI
HTGDKPYKCNECGKSFRQCSDLKNHYRIHSGDKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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