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Report for CCDS11674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11674.1 Public Homo sapiens 17 AMZ2 24 110 108 CCDS HistoryNCBI Gene:51321Re-query CCDS DB by CCDS ID:11674.1Re-query CCDS DB by GeneID:51321See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11674.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359904.8 ENSP00000352976.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359904.8Link to Ensembl Protein Viewer:ENSP00000352976.3Re-query CCDS DB by Nucleotide ID:ENST00000359904Re-query CCDS DB by Protein ID:ENSP00000352976
Original member Current member EBI ENST00000392720.6 ENSP00000376481.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392720.6Link to Ensembl Protein Viewer:ENSP00000376481.2Re-query CCDS DB by Nucleotide ID:ENST00000392720Re-query CCDS DB by Protein ID:ENSP00000376481
Original member Current member EBI ENST00000580753.5 ENSP00000463012.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000580753.5Link to Ensembl Protein Viewer:ENSP00000463012.1Re-query CCDS DB by Nucleotide ID:ENST00000580753Re-query CCDS DB by Protein ID:ENSP00000463012
Original member Current member EBI ENST00000577866.5 ENSP00000464133.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000577866.5Link to Ensembl Protein Viewer:ENSP00000464133.1Re-query CCDS DB by Nucleotide ID:ENST00000577866Re-query CCDS DB by Protein ID:ENSP00000464133
Original member Current member EBI ENST00000577985.5 ENSP00000464635.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000577985.5Link to Ensembl Protein Viewer:ENSP00000464635.1Re-query CCDS DB by Nucleotide ID:ENST00000577985Re-query CCDS DB by Protein ID:ENSP00000464635
Original member Current member EBI ENST00000612294.4 ENSP00000483162.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612294.4Link to Ensembl Protein Viewer:ENSP00000483162.1Re-query CCDS DB by Nucleotide ID:ENST00000612294Re-query CCDS DB by Protein ID:ENSP00000483162
Original member Current member EBI ENST00000674770.2 ENSP00000501934.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674770.2Link to Ensembl Protein Viewer:ENSP00000501934.1Re-query CCDS DB by Nucleotide ID:ENST00000674770Re-query CCDS DB by Protein ID:ENSP00000501934
Original member Current member NCBI NM_001033569.2 NP_001028741.1 Accepted alive Link to Nucleotide Sequence:NM_001033569.2Link to Protein Sequence:NP_001028741.1Re-query CCDS DB by Nucleotide ID:NM_001033569Re-query CCDS DB by Protein ID:NP_001028741Link to BLAST:NP_001028741.1
Original member Current member NCBI NM_001033570.2 NP_001028742.1 Accepted alive Link to Nucleotide Sequence:NM_001033570.2Link to Protein Sequence:NP_001028742.1Re-query CCDS DB by Nucleotide ID:NM_001033570Re-query CCDS DB by Protein ID:NP_001028742Link to BLAST:NP_001028742.1
Original member Current member NCBI NM_001033571.1 NP_001028743.1 Accepted alive Link to Nucleotide Sequence:NM_001033571.1Link to Protein Sequence:NP_001028743.1Re-query CCDS DB by Nucleotide ID:NM_001033571Re-query CCDS DB by Protein ID:NP_001028743Link to BLAST:NP_001028743.1
Original member Current member NCBI NM_001033572.1 NP_001028744.1 Accepted alive Link to Nucleotide Sequence:NM_001033572.1Link to Protein Sequence:NP_001028744.1Re-query CCDS DB by Nucleotide ID:NM_001033572Re-query CCDS DB by Protein ID:NP_001028744Link to BLAST:NP_001028744.1
Original member Current member NCBI NM_001289054.2 NP_001275983.1 Accepted alive Link to Nucleotide Sequence:NM_001289054.2Link to Protein Sequence:NP_001275983.1Re-query CCDS DB by Nucleotide ID:NM_001289054Re-query CCDS DB by Protein ID:NP_001275983Link to BLAST:NP_001275983.1
Original member Current member NCBI NM_001289056.2 NP_001275985.1 Accepted alive Link to Nucleotide Sequence:NM_001289056.2Link to Protein Sequence:NP_001275985.1Re-query CCDS DB by Nucleotide ID:NM_001289056Re-query CCDS DB by Protein ID:NP_001275985Link to BLAST:NP_001275985.1
Original member Current member NCBI NM_001346471.1 NP_001333400.1 Accepted alive Link to Nucleotide Sequence:NM_001346471.1Link to Protein Sequence:NP_001333400.1Re-query CCDS DB by Nucleotide ID:NM_001346471Re-query CCDS DB by Protein ID:NP_001333400Link to BLAST:NP_001333400.1
Original member Current member NCBI NM_001346472.1 NP_001333401.1 Accepted alive Link to Nucleotide Sequence:NM_001346472.1Link to Protein Sequence:NP_001333401.1Re-query CCDS DB by Nucleotide ID:NM_001346472Re-query CCDS DB by Protein ID:NP_001333401Link to BLAST:NP_001333401.1
Original member Current member NCBI NM_001346473.1 NP_001333402.1 Accepted alive Link to Nucleotide Sequence:NM_001346473.1Link to Protein Sequence:NP_001333402.1Re-query CCDS DB by Nucleotide ID:NM_001346473Re-query CCDS DB by Protein ID:NP_001333402Link to BLAST:NP_001333402.1
Original member Current member NCBI NM_001346474.2 NP_001333403.1 Accepted alive Link to Nucleotide Sequence:NM_001346474.2Link to Protein Sequence:NP_001333403.1Re-query CCDS DB by Nucleotide ID:NM_001346474Re-query CCDS DB by Protein ID:NP_001333403Link to BLAST:NP_001333403.1
Original member Current member NCBI NM_001346475.2 NP_001333404.1 Accepted alive Link to Nucleotide Sequence:NM_001346475.2Link to Protein Sequence:NP_001333404.1Re-query CCDS DB by Nucleotide ID:NM_001346475Re-query CCDS DB by Protein ID:NP_001333404Link to BLAST:NP_001333404.1
Original member Current member NCBI NM_001346476.2 NP_001333405.1 Accepted alive Link to Nucleotide Sequence:NM_001346476.2Link to Protein Sequence:NP_001333405.1Re-query CCDS DB by Nucleotide ID:NM_001346476Re-query CCDS DB by Protein ID:NP_001333405Link to BLAST:NP_001333405.1
Original member Current member NCBI NM_001346477.2 NP_001333406.1 Accepted alive Link to Nucleotide Sequence:NM_001346477.2Link to Protein Sequence:NP_001333406.1Re-query CCDS DB by Nucleotide ID:NM_001346477Re-query CCDS DB by Protein ID:NP_001333406Link to BLAST:NP_001333406.1
Original member Current member NCBI NM_001346478.2 NP_001333407.1 Accepted alive Link to Nucleotide Sequence:NM_001346478.2Link to Protein Sequence:NP_001333407.1Re-query CCDS DB by Nucleotide ID:NM_001346478Re-query CCDS DB by Protein ID:NP_001333407Link to BLAST:NP_001333407.1
Original member Current member NCBI NM_001346479.2 NP_001333408.1 Accepted alive Link to Nucleotide Sequence:NM_001346479.2Link to Protein Sequence:NP_001333408.1Re-query CCDS DB by Nucleotide ID:NM_001346479Re-query CCDS DB by Protein ID:NP_001333408Link to BLAST:NP_001333408.1
Original member Current member NCBI NM_016627.5 NP_057711.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016627.5Link to Protein Sequence:NP_057711.3Re-query CCDS DB by Nucleotide ID:NM_016627Re-query CCDS DB by Protein ID:NP_057711Link to BLAST:NP_057711.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028741.1 360 Q86W34-4 360 100% 0 0
NP_001028742.1 360 Q86W34-4 360 100% 0 0
NP_001028743.1 360 Q86W34-4 360 100% 0 0
NP_001028744.1 360 Q86W34-4 360 100% 0 0
NP_001275983.1 360 Q86W34-4 360 100% 0 0
NP_001275985.1 360 Q86W34-4 360 100% 0 0
NP_001333400.1 360 Q86W34-4 360 100% 0 0
NP_001333401.1 360 Q86W34-4 360 100% 0 0
NP_001333402.1 360 Q86W34-4 360 100% 0 0
NP_001333403.1 360 Q86W34-4 360 100% 0 0
NP_001333404.1 360 Q86W34-4 360 100% 0 0
NP_001333405.1 360 Q86W34-4 360 100% 0 0
NP_001333406.1 360 Q86W34-4 360 100% 0 0
NP_001333407.1 360 Q86W34-4 360 100% 0 0
NP_001333408.1 360 Q86W34-4 360 100% 0 0
NP_057711.3 360 Q86W34-4 360 100% 0 0

Chromosomal Locations for CCDS 11674.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 68250188 68250470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68250794 68250967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68251050 68251178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68254404 68254567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68255700 68255876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68256814 68256969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1083 nt):
ATGCAAATAATACGGCACTCCGAACAGACACTAAAAACAGCTCTCATCTCAAAGAACCCAGTGCTTGTAT
CACAGTATGAGAAATTAAATGCTGGGGAACAACGTTTAATGAATGAAGCCTTCCAGCCAGCCAGTGATCT
CTTTGGACCCATTACCTTGCATTCTCCATCAGATTGGATCACCTCCCACCCTGAGGCTCCCCAAGACTTT
GAACAGTTCTTCAGTGATCCTTACAGAAAGACACCCTCTCCAAACAAACGCAGCATTTATATACAGTCCA
TTGGCTCTCTAGGAAACACCAGAATTATCAGTGAAGAATATATTAAATGGCTCACGGGCTACTGTAAAGC
ATATTTCTATGGCTTGAGAGTAAAACTCCTAGAACCAGTTCCTGTTTCTGTAACAAGATGTTCCTTTAGA
GTCAATGAGAACACACACAACCTACAAATTCATGCAGGGGACATCCTGAAGTTCTTGAAAAAGAAGAAAC
CTGAAGATGCCTTCTGTGTTGTGGGAATAACAATGATTGATCTTTACCCAAGAGACTCGTGGAATTTTGT
CTTTGGACAGGCCTCTTTGACAGATGGTGTGGGGATATTCAGCTTTGCCAGGTATGGCAGTGATTTTTAT
AGCATGCACTATAAAGGCAAAGTGAAGAAGCTCAAGAAAACATCTTCAAGTGACTATTCAATTTTCGACA
ACTATTATATTCCAGAAATAACTAGTGTTTTACTACTTCGATCCTGTAAGACTTTAACCCATGAGATCGG
ACACATATTTGGACTGCGACACTGCCAGTGGCTTGCATGCCTCATGCAAGGCTCCAACCACTTGGAAGAA
GCTGACCGGCGCCCTCTAAACCTTTGCCCTATCTGTTTGCACAAGTTGCAGTGTGCTGTTGGCTTCAGCA
TTGTAGAAAGATACAAAGCACTGGTGAGGTGGATTGATGATGAATCTTCTGACACACCTGGAGCAACTCC
AGAACACAGTCACGAGGATAATGGGAATTTACCGAAACCCGTGGAAGCCTTTAAGGAATGGAAAGAGTGG
ATAATAAAATGCCTGGCTGTTCTCCAAAAATGA

Translation (360 aa):
MQIIRHSEQTLKTALISKNPVLVSQYEKLNAGEQRLMNEAFQPASDLFGPITLHSPSDWITSHPEAPQDF
EQFFSDPYRKTPSPNKRSIYIQSIGSLGNTRIISEEYIKWLTGYCKAYFYGLRVKLLEPVPVSVTRCSFR
VNENTHNLQIHAGDILKFLKKKKPEDAFCVVGITMIDLYPRDSWNFVFGQASLTDGVGIFSFARYGSDFY
SMHYKGKVKKLKKTSSSDYSIFDNYYIPEITSVLLLRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEE
ADRRPLNLCPICLHKLQCAVGFSIVERYKALVRWIDDESSDTPGATPEHSHEDNGNLPKPVEAFKEWKEW
IIKCLAVLQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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