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Report for CCDS26249.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26249.1 Public Mus musculus 13 Mrpl32 23 108 98 CCDS HistoryNCBI Gene:75398Re-query CCDS DB by CCDS ID:26249.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26249.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000220621.1 ENSMUSP00000152345.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000220621.1Link to Ensembl Protein Viewer:ENSMUSP00000152345.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000220621Re-query CCDS DB by Protein ID:ENSMUSP00000152345
Original member Current member NCBI NM_029271.2 NP_083547.1 Accepted alive Link to Nucleotide Sequence:NM_029271.2Link to Protein Sequence:NP_083547.1Re-query CCDS DB by Nucleotide ID:NM_029271Re-query CCDS DB by Protein ID:NP_083547Link to BLAST:NP_083547.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083547.1 187 Q9DCI9 187 100% 0 0

Chromosomal Locations for CCDS 26249.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 14610486 14610740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14611423 14611604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14612892 14613018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (564 nt):
ATGGCTCCTTCGTTGCTGCTGCTTTCACTACCATGGCCGGTGCGTCCCGGACCGCTCCAGAGGTGCTGGG
AGCTGCTACAACGGCAACTGCAGCAGAGCTGGAGTCGCTTTGTCAGTCCTCCGTGGGCACCAGCATTAGC
CGTCCAGAGACCATCCATCCTCACAGAGCTAGCACATGATACTTGTGAAAATAAAGAGAATTCCAGCTTT
TTAGATAGTATCTTTTGGATGGCAGCTCCCAAAAACAGACGCACCATCGAAGTTAACCGATGTAGGAGAA
GAAACCCTCAAAAGCTTATTAAAATTAAGAACAATATAGACATTTGCCCTGAATGTGGTCACCTGAAGCA
GAAACATGTCCTTTGTGGATATTGCTATGAGAAAGTACGCCAGGAGACGACAAAAATCAGACAACAAATA
GGGGCTCAAGAAGGAGGTCCTTTCAGAGCTCCTTCCGTTGAGACTATGGTGCTGTACACAGGAGAGAAAC
CATCAGAAAAGGATCAGGGCAAGAGGATTGTTGAAAGAAACATAAAGAGGCCATCTTGGTTCACCCAGAA
TTGA

Translation (187 aa):
MAPSLLLLSLPWPVRPGPLQRCWELLQRQLQQSWSRFVSPPWAPALAVQRPSILTELAHDTCENKENSSF
LDSIFWMAAPKNRRTIEVNRCRRRNPQKLIKIKNNIDICPECGHLKQKHVLCGYCYEKVRQETTKIRQQI
GAQEGGPFRAPSVETMVLYTGEKPSEKDQGKRIVERNIKRPSWFTQN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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