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Report for CCDS3705.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3705.1 Public Homo sapiens 4 UGT8 24 110 108 CCDS HistoryNCBI Gene:7368Re-query CCDS DB by CCDS ID:3705.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3705.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310836.11 ENSP00000311648.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310836.11Link to Ensembl Protein Viewer:ENSP00000311648.6Re-query CCDS DB by Nucleotide ID:ENST00000310836Re-query CCDS DB by Protein ID:ENSP00000311648
Original member Current member EBI ENST00000394511.3 ENSP00000378019.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394511.3Link to Ensembl Protein Viewer:ENSP00000378019.3Re-query CCDS DB by Nucleotide ID:ENST00000394511Re-query CCDS DB by Protein ID:ENSP00000378019
Original member Current member NCBI NM_001128174.3 NP_001121646.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001128174.3Link to Protein Sequence:NP_001121646.2Re-query CCDS DB by Nucleotide ID:NM_001128174Re-query CCDS DB by Protein ID:NP_001121646Link to BLAST:NP_001121646.2
Original member Current member NCBI NM_001322112.2 NP_001309041.2 Accepted alive Link to Nucleotide Sequence:NM_001322112.2Link to Protein Sequence:NP_001309041.2Re-query CCDS DB by Nucleotide ID:NM_001322112Re-query CCDS DB by Protein ID:NP_001309041Link to BLAST:NP_001309041.2
Original member Current member NCBI NM_001322113.2 NP_001309042.2 Accepted alive Link to Nucleotide Sequence:NM_001322113.2Link to Protein Sequence:NP_001309042.2Re-query CCDS DB by Nucleotide ID:NM_001322113Re-query CCDS DB by Protein ID:NP_001309042Link to BLAST:NP_001309042.2
Original member Current member NCBI NM_001322114.2 NP_001309043.2 Accepted alive Link to Nucleotide Sequence:NM_001322114.2Link to Protein Sequence:NP_001309043.2Re-query CCDS DB by Nucleotide ID:NM_001322114Re-query CCDS DB by Protein ID:NP_001309043Link to BLAST:NP_001309043.2
Original member Current member NCBI NM_003360.5 NP_003351.3 Accepted alive Link to Nucleotide Sequence:NM_003360.5Link to Protein Sequence:NP_003351.3Re-query CCDS DB by Nucleotide ID:NM_003360Re-query CCDS DB by Protein ID:NP_003351Link to BLAST:NP_003351.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121646.2 541 Q16880 541 100% 0 0
NP_001309041.2 541 Q16880 541 100% 0 0
NP_001309042.2 541 Q16880 541 100% 0 0
NP_001309043.2 541 Q16880 541 100% 0 0
NP_003351.3 541 Q16880 541 100% 0 0

Chromosomal Locations for CCDS 3705.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 114622881 114623702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 114663995 114664137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 114665680 114665756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 114668085 114668304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 114675925 114676288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGAAGTCTTACACTCCATATTTCATTCTCCTGTGGAGTGCTGTTGGGATAGCGAAGGCTGCCAAAATCA
TCATCGTGCCGCCAATTATGTTTGAAAGCCATATGTACATTTTCAAGACGCTAGCCTCAGCCTTGCACGA
GAGAGGCCACCATACAGTGTTCCTCCTCTCTGAAGGCAGAGACATCGCCCCATCTAATCATTACAGCCTC
CAGCGCTACCCAGGGATCTTTAACAGTACCACCTCAGATGCTTTCCTACAGTCCAAGATGCGGAATATTT
TCTCTGGGAGATTGACAGCAATCGAACTGTTTGACATACTGGATCACTATACTAAGAACTGTGACCTGAT
GGTTGGCAACCATGCCCTGATCCAGGGTCTGAAGAAAGAAAAATTTGACCTGCTGCTGGTGGACCCTAAT
GATATGTGTGGATTTGTGATAGCTCATCTTTTAGGGGTTAAATATGCTGTATTTTCAACTGGCCTTTGGT
ATCCTGCTGAAGTGGGTGCTCCTGCTCCATTAGCATACGTCCCAGAGTTTAACTCACTCCTCACAGACCG
CATGAACTTGCTGCAAAGGATGAAAAATACCGGTGTTTACCTCATTTCCAGATTAGGGGTCAGCTTTCTG
GTTCTTCCCAAATATGAAAGGATAATGCAGAAGTACAACCTGCTGCCAGAGAAGTCCATGTATGATTTGG
TTCATGGGTCCAGCCTGTGGATGCTGTGTACTGACGTAGCACTGGAATTCCCAAGACCCACTCTGCCTAA
TGTTGTTTATGTAGGAGGAATCCTAACCAAACCAGCCAGCCCACTACCAGAAGATCTCCAAAGATGGGTA
AATGGTGCTAATGAACATGGCTTTGTCTTGGTGTCTTTTGGAGCTGGTGTCAAGTATCTGTCAGAAGACA
TTGCTAACAAACTGGCAGGAGCTCTGGGGAGATTGCCTCAAAAAGTGATTTGGAGGTTTTCTGGACCCAA
ACCAAAGAATCTAGGAAACAACACTAAACTCATAGAATGGTTACCACAAAATGACCTGCTTGGGCATTCA
AAGATTAAAGCCTTCCTGAGCCATGGTGGTTTGAACAGTATTTTTGAAACTATATATCATGGTGTGCCTG
TAGTGGGAATTCCACTCTTTGGAGACCATTATGATACTATGACCAGAGTACAGGCAAAAGGCATGGGGAT
ATTGCTAGAATGGAAGACAGTTACTGAAAAAGAGCTCTATGAAGCACTAGTGAAGGTTATCAATAATCCC
AGCTACCGTCAGAGGGCTCAGAAGCTTTCGGAAATTCACAAGGATCAACCTGGTCACCCTGTCAATCGAA
CTATCTATTGGATAGATTATATTATTCGTCACAATGGAGCCCATCACCTACGTGCCGCTGTCCATCAGAT
CTCCTTTTGTCAGTATTTTTTACTGGATATTGCCTTTGTGCTTTTGCTTGGTGCTGCCTTGTTATACTTT
CTCTTGTCTTGGGTGACAAAATTTATCTACAGAAAAATCAAAAGTCTGTGGTCTAGAAATAAGCATAGCA
CAGTTAATGGACATTACCACAATGGAATCCTCAATGGCAAGTACAAAAGAAATGGCCATATTAAACATGA
AAAGAAAGTGAAATGA

Translation (541 aa):
MKSYTPYFILLWSAVGIAKAAKIIIVPPIMFESHMYIFKTLASALHERGHHTVFLLSEGRDIAPSNHYSL
QRYPGIFNSTTSDAFLQSKMRNIFSGRLTAIELFDILDHYTKNCDLMVGNHALIQGLKKEKFDLLLVDPN
DMCGFVIAHLLGVKYAVFSTGLWYPAEVGAPAPLAYVPEFNSLLTDRMNLLQRMKNTGVYLISRLGVSFL
VLPKYERIMQKYNLLPEKSMYDLVHGSSLWMLCTDVALEFPRPTLPNVVYVGGILTKPASPLPEDLQRWV
NGANEHGFVLVSFGAGVKYLSEDIANKLAGALGRLPQKVIWRFSGPKPKNLGNNTKLIEWLPQNDLLGHS
KIKAFLSHGGLNSIFETIYHGVPVVGIPLFGDHYDTMTRVQAKGMGILLEWKTVTEKELYEALVKVINNP
SYRQRAQKLSEIHKDQPGHPVNRTIYWIDYIIRHNGAHHLRAAVHQISFCQYFLLDIAFVLLLGAALLYF
LLSWVTKFIYRKIKSLWSRNKHSTVNGHYHNGILNGKYKRNGHIKHEKKVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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