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Report for CCDS8228.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8228.1 Public Homo sapiens 11 UCP2 24 110 108 CCDS HistoryNCBI Gene:7351Re-query CCDS DB by CCDS ID:8228.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8228.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310473.9 ENSP00000312029.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000310473.9Link to Ensembl Protein Viewer:ENSP00000312029.3Re-query CCDS DB by Nucleotide ID:ENST00000310473Re-query CCDS DB by Protein ID:ENSP00000312029
Original member Current member EBI ENST00000663595.2 ENSP00000499695.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000663595.2Link to Ensembl Protein Viewer:ENSP00000499695.1Re-query CCDS DB by Nucleotide ID:ENST00000663595Re-query CCDS DB by Protein ID:ENSP00000499695
Original member Current member NCBI NM_001381943.1 NP_001368872.1 Accepted alive Link to Nucleotide Sequence:NM_001381943.1Link to Protein Sequence:NP_001368872.1Re-query CCDS DB by Nucleotide ID:NM_001381943Re-query CCDS DB by Protein ID:NP_001368872Link to BLAST:NP_001368872.1
Original member Current member NCBI NM_001381944.1 NP_001368873.1 Accepted alive Link to Nucleotide Sequence:NM_001381944.1Link to Protein Sequence:NP_001368873.1Re-query CCDS DB by Nucleotide ID:NM_001381944Re-query CCDS DB by Protein ID:NP_001368873Link to BLAST:NP_001368873.1
Original member Current member NCBI NM_001381945.1 NP_001368874.1 Accepted alive Link to Nucleotide Sequence:NM_001381945.1Link to Protein Sequence:NP_001368874.1Re-query CCDS DB by Nucleotide ID:NM_001381945Re-query CCDS DB by Protein ID:NP_001368874Link to BLAST:NP_001368874.1
Original member Current member NCBI NM_001381947.1 NP_001368876.1 Accepted alive Link to Nucleotide Sequence:NM_001381947.1Link to Protein Sequence:NP_001368876.1Re-query CCDS DB by Nucleotide ID:NM_001381947Re-query CCDS DB by Protein ID:NP_001368876Link to BLAST:NP_001368876.1
Original member Current member NCBI NM_001381948.1 NP_001368877.1 Accepted alive Link to Nucleotide Sequence:NM_001381948.1Link to Protein Sequence:NP_001368877.1Re-query CCDS DB by Nucleotide ID:NM_001381948Re-query CCDS DB by Protein ID:NP_001368877Link to BLAST:NP_001368877.1
Original member Current member NCBI NM_003355.3 NP_003346.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003355.3Link to Protein Sequence:NP_003346.2Re-query CCDS DB by Nucleotide ID:NM_003355Re-query CCDS DB by Protein ID:NP_003346Link to BLAST:NP_003346.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001368872.1 309 P55851 309 100% 0 0
NP_001368873.1 309 P55851 309 100% 0 0
NP_001368874.1 309 P55851 309 100% 0 0
NP_001368876.1 309 P55851 309 100% 0 0
NP_001368877.1 309 P55851 309 100% 0 0
NP_003346.2 309 P55851 309 100% 0 0

Chromosomal Locations for CCDS 8228.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 73975007 73975121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73975491 73975671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73976641 73976742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73976823 73977017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73977886 73978096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73978253 73978378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGTTGGGTTCAAGGCCACAGATGTGCCCCCTACTGCCACTGTGAAGTTTCTTGGGGCTGGCACAGCTG
CCTGCATCGCAGATCTCATCACCTTTCCTCTGGATACTGCTAAAGTCCGGTTACAGATCCAAGGAGAAAG
TCAGGGGCCAGTGCGCGCTACAGCCAGCGCCCAGTACCGCGGTGTGATGGGCACCATTCTGACCATGGTG
CGTACTGAGGGCCCCCGAAGCCTCTACAATGGGCTGGTTGCCGGCCTGCAGCGCCAAATGAGCTTTGCCT
CTGTCCGCATCGGCCTGTATGATTCTGTCAAACAGTTCTACACCAAGGGCTCTGAGCATGCCAGCATTGG
GAGCCGCCTCCTAGCAGGCAGCACCACAGGTGCCCTGGCTGTGGCTGTGGCCCAGCCCACGGATGTGGTA
AAGGTCCGATTCCAAGCTCAGGCCCGGGCTGGAGGTGGTCGGAGATACCAAAGCACCGTCAATGCCTACA
AGACCATTGCCCGAGAGGAAGGGTTCCGGGGCCTCTGGAAAGGGACCTCTCCCAATGTTGCTCGTAATGC
CATTGTCAACTGTGCTGAGCTGGTGACCTATGACCTCATCAAGGATGCCCTCCTGAAAGCCAACCTCATG
ACAGATGACCTCCCTTGCCACTTCACTTCTGCCTTTGGGGCAGGCTTCTGCACCACTGTCATCGCCTCCC
CTGTAGACGTGGTCAAGACGAGATACATGAACTCTGCCCTGGGCCAGTACAGTAGCGCTGGCCACTGTGC
CCTTACCATGCTCCAGAAGGAGGGGCCCCGAGCCTTCTACAAAGGGTTCATGCCCTCCTTTCTCCGCTTG
GGTTCCTGGAACGTGGTGATGTTCGTCACCTATGAGCAGCTGAAACGAGCCCTCATGGCTGCCTGCACTT
CCCGAGAGGCTCCCTTCTGA

Translation (309 aa):
MVGFKATDVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMV
RTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHASIGSRLLAGSTTGALAVAVAQPTDVV
KVRFQAQARAGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLM
TDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRL
GSWNVVMFVTYEQLKRALMAACTSREAPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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