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Report for CCDS21440.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21440.1 Public Mus musculus 7 Tmem135 23 108 98 CCDS HistoryNCBI Gene:72759Re-query CCDS DB by CCDS ID:21440.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21440.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041968.10 ENSMUSP00000042783.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041968.10Link to Ensembl Protein Viewer:ENSMUSP00000042783.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000041968Re-query CCDS DB by Protein ID:ENSMUSP00000042783
Original member Current member NCBI NM_028343.5 NP_082619.3 Accepted alive Link to Nucleotide Sequence:NM_028343.5Link to Protein Sequence:NP_082619.3Re-query CCDS DB by Nucleotide ID:NM_028343Re-query CCDS DB by Protein ID:NP_082619Link to BLAST:NP_082619.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082619.3 458 Q9CYV5 458 100% 0 0

Chromosomal Locations for CCDS 21440.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 89141838 89141970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89143781 89143848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89144657 89144755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89147970 89148046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89151413 89151476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89154028 89154195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89156427 89156496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89158869 89159015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89165125 89165166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89196113 89196159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89243921 89243986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89279967 89280000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89304681 89304773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89307137 89307264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89338448 89338588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1377 nt):
ATGGCGGCCCTCAGCAAGTCCATCCCTCATAACTGCTACGAGATCGGCCACACTTGGCACCCCTCCTGCA
GGGTCTCCTTCCTGCAGATCACTTGGGGCGCCCTGGAGGAGTCCCTCAGGATCTACGCACCCCTGTACCT
GATTGCAGCTGTTCTCCGGAAGCGCAAGCTGGAGTATTACCTGTACAAACTGCTTCCTGAGATCCTCCAG
TCCGCCTCCTTCCTGACTGCTAATGGGGCCTTGTACATTACTTTCTTCTGCATTTTAAGGAAGATCCTTG
GAAAATTCTACTCATGGACTCCTGGCTTTGGTGCTGCTCTGCCAGCCTCATATGTGGCCATTCTAATTGA
AAGAAAAAGCAGGAGAGGGCTGCTCACAATTTATATGGCCAACTTGGCCACAGAAACACTATTTAGAATG
GGTGTTGCAAGAGGAACCATCACGACGTTAAGAAATGGAGAAGTCCTTTTGTTCTGCATCACAGCGGCCA
TGTACATGTTCTTTTTCAGGTGCAAAGATGGCTTAAAAGGCTTTACATTTTCTGCACTTAGGTTTATCGT
GGGGAAGGAAGAAATTCCCACGCACTCTTACTCACCAGAGACAGCGTATGCCAAAGTGGAACAGAAGAGG
GAGAAGCACAAGGGAACGCCGAGAGCAATGAGCATAATCGCTCTGGTTCGGACTCTCGTGGACTCCGTAT
GCAAGCATGGACCAAGGCACAGATGCTGCAAGCATTATGAAGACAACTGCATTTCCTACTGCATTAAAGG
CTTCATCAGAATGTTCAGCGTGGGCTACTTGATCCAGTGCTGTCTCCGGATCCCCTCTGCGTTTAGGCAT
CTGTTTACAGAACCATCCCGGCTCCTCTCTCTTTTCTACAACAAGGAGAACTTCCAGCTGGGGGCTTTCC
TTGGATCTTTTGTTAGTATATACAAGGGCACAAGTTGTTTCCTGCGCTGGATCAGGAATCTGGATGACGA
GCTGCATGCTATTGTGGCTGGGTTTTTGGCAGGTGTGTCGATGATGTTTTATAAAAGCACAACAATTTCC
ATGTACCTAGCTTCCAAGCTGGTGGAGACAATGTATTTCAAGGGCATCGAGGCTGGAAAGGTTCCCTATT
TTCCTCAAGCAGATACGATCATCTATTCCATCTCTACAGCAATTTGTTTCCACGCAGCTGTTATGGAAGT
TCAGAACTTGCGACCATCTTACTGGAAGTTCCTTTTAAGGCTCACCAAGGGCAGGTTTGCACTCATGAAC
CGAAAAGCCCTGGATGTGTTTGGTACTGGCGCATCTAGAGAGTTTCACAACTTCATCCCCAGACTAGACC
CACGGTACACAGTTGTCACACCGGAGCTGCCCATAGACTTTTCCTGA

Translation (458 aa):
MAALSKSIPHNCYEIGHTWHPSCRVSFLQITWGALEESLRIYAPLYLIAAVLRKRKLEYYLYKLLPEILQ
SASFLTANGALYITFFCILRKILGKFYSWTPGFGAALPASYVAILIERKSRRGLLTIYMANLATETLFRM
GVARGTITTLRNGEVLLFCITAAMYMFFFRCKDGLKGFTFSALRFIVGKEEIPTHSYSPETAYAKVEQKR
EKHKGTPRAMSIIALVRTLVDSVCKHGPRHRCCKHYEDNCISYCIKGFIRMFSVGYLIQCCLRIPSAFRH
LFTEPSRLLSLFYNKENFQLGAFLGSFVSIYKGTSCFLRWIRNLDDELHAIVAGFLAGVSMMFYKSTTIS
MYLASKLVETMYFKGIEAGKVPYFPQADTIIYSISTAICFHAAVMEVQNLRPSYWKFLLRLTKGRFALMN
RKALDVFGTGASREFHNFIPRLDPRYTVVTPELPIDFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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