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Report for CCDS34847.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34847.1 Public Homo sapiens 8 DEFB134 24 110 108 CCDS HistoryNCBI Gene:613211Re-query CCDS DB by CCDS ID:34847.1Re-query CCDS DB by GeneID:613211See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34847.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382205.6 ENSP00000371640.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382205.6Link to Ensembl Protein Viewer:ENSP00000371640.4Re-query CCDS DB by Nucleotide ID:ENST00000382205Re-query CCDS DB by Protein ID:ENSP00000371640
Original member Current member EBI ENST00000526438.6 ENSP00000435010.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526438.6Link to Ensembl Protein Viewer:ENSP00000435010.1Re-query CCDS DB by Nucleotide ID:ENST00000526438Re-query CCDS DB by Protein ID:ENSP00000435010
Original member Current member NCBI NM_001302695.2 NP_001289624.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001302695.2Link to Protein Sequence:NP_001289624.1Re-query CCDS DB by Nucleotide ID:NM_001302695Re-query CCDS DB by Protein ID:NP_001289624Link to BLAST:NP_001289624.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289624.1 66 Q4QY38 66 100% 0 0

Chromosomal Locations for CCDS 34847.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 11993980 11994122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 11996194 11996251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (201 nt):
ATGAAGCCTCTCCTTGTTGTGTTTGTCTTTCTTTTCCTTTGGGATCCAGTGCTGGCAGGTATAAATTCAT
TATCATCAGAAATGCACAAGAAATGCTATAAAAATGGCATCTGCAGACTTGAATGCTATGAGAGTGAAAT
GTTAGTTGCCTACTGTATGTTTCAGCTGGAGTGCTGTGTCAAAGGAAATCCTGCACCCTGA

Translation (66 aa):
MKPLLVVFVFLFLWDPVLAGINSLSSEMHKKCYKNGICRLECYESEMLVAYCMFQLECCVKGNPAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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