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Report for CCDS37186.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37186.1 Public Mus musculus 15 Scaf11 23 108 98 CCDS HistoryNCBI Gene:72193Re-query CCDS DB by CCDS ID:37186.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37186.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047835.7 ENSMUSP00000044898.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047835.7Link to Ensembl Protein Viewer:ENSMUSP00000044898.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000047835Re-query CCDS DB by Protein ID:ENSMUSP00000044898
Original member NCBI NM_028148.2 NP_082424.2 Updated not alive Link to Nucleotide Sequence:NM_028148.2Link to Protein Sequence:NP_082424.2Re-query CCDS DB by Nucleotide ID:NM_028148Re-query CCDS DB by Protein ID:NP_082424
Current member NCBI NM_028148.3 NP_082424.2 Accepted alive Link to Nucleotide Sequence:NM_028148.3Link to Protein Sequence:NP_082424.2Re-query CCDS DB by Nucleotide ID:NM_028148Re-query CCDS DB by Protein ID:NP_082424Link to BLAST:NP_082424.2

Chromosomal Locations for CCDS 37186.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 96414788 96414916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96415032 96415151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96415777 96415947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96416849 96417189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96418072 96420846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96421946 96422052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96423517 96423618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96424570 96424676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96424829 96424884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96431781 96431845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96432324 96432424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96434920 96434997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96443945 96444102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96446510 96446570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4371 nt):
ATGAAGAAGAAATCTGTATATAATCAGAATGTGGGTGATCAGGAGTGTGACGACATGGAAGGTGAAGAAA
ACAGCAATACTGCCGATGCCTCTGGCTTACTGTACAGTGAAGCGGACAGATGTCCAATATGTCTCAGTTG
CCTGTTAGGGAAGGAAGTTGGTTTTCCAGAAAGTTGTAATCATGTCTTCTGTATGGCCTGTATTCTTAAA
TGGGCAGAGATATTGGCTTCTTGTCCAATCGATCGGAAACCTTTTCAGGCCGTGTTTGAACTCAGTGCAT
TTGAAGGTTGTGCTAAGATTCAAGTGAAAAGACGGTTGAGAGAAACAGAGGACAAGGAAAATCAAAGGTC
TTTTAAGAAGCAACTCTTTTATCATGAGAGTTCCAAAGGCAACAAGAGAAAAAGAAACACCATAAGAGAA
GATCTGTTATGTGAAAGATCTGATGGCTTGAAGGTGTTGTATAGAAACATTTCAAACAAAATGGATGGAA
AGAAAAATGCTACAGTAAAGACAAATAAGGTTCAAAGATCAAATCAGTGTACAGATTCGTGTATTAGAAA
TGAGATGTCCAGTGTGTTTTCATGTGGCAGCCACAGCTGGGGACCTCGCACCCATAGAGCTTCCTGTACA
GAATCTATAGAAGTCAATGAGATCAGTGCATTGATTAGACAAAAACGACAGGAACTGGAGTTGTCATGGT
TTCCTAATACATTACCTGGAAATGGAAGAGTTGGCTCCGTACCCTGGAGTGTAGAGACAGCCTTCCTCTC
TCTGGCTTCCTCAGGCTTGCCAAGGACGGTTTTCCCAGCAAGTACCACGTCGCTAGAGCATTTTGGTACT
TCTCATAAGGGATATGCATTAGCACATACCCAAGGAGGAGGAGAAAAAAAGCAAACTTCAGGCACATCAA
ACACCAGAGGATCGAGACGAAAACCTGCAGCAACTGCTCCTACAAGGAGGTCCACGCGAAACACTCGAGC
CGAGACAGTCAGTCAGTCCCAGAAGTCCCCAGTGTCAAACTATTCTGAGTGTGATGCCCCAGGGAATAGT
AATTCCTCTGTAAGTATTTCCCCTCCAGCTGAATCAGAAAAGCAAACAAGACAGGCTCCAAAACGGAAGT
CTGTAAGGAGAGGAAGAAAACCACCTTTATTGAAAAAGAAACTTAGGAGATCTGTACCTCCCGCTGAAAA
ATCATCTAGCGATTCAGTAGAGGAAGAAACTGTGGACTCTGACACTCCACCCGTGTTGGAGAAAGAGCAA
CAATCGTGTGTAGAAAGCAGTAGCATTTGCTCTGTTCAAACCGATGAAGAGAATCATCTGCATCTTGAAA
GTTGCAGTGAACAAACAGAAGAAAATGAACAAGCCAACAATCATGAGATTGAGGAGCAAACAGAAAGTTT
AAATTCTGAATCTTGCACTCAGGACCCTCCTGGGCTTGTTGGAGAAGATACAGGGATAGAGGCCAAGGAG
TTCTGTGCAGACCATGATATTTCGCCAGATACTTCTCTAAGAGGAAGGGATTCAGCAGAACACCAAGAGC
AGCTGTCTGGAAGCTCGGAGTCAGAGGTCCAGGCACTTGTGTGTACGGAGAGTCCTCCTGAAGGGTCTCC
TACATGTCCACCTTCCGACATCGAACACCAACCTGTGTCCAGTCCCCTGGGTGAAGTATCCGATAACACC
ACACCAGTGGTTAGCGATGAAAGAGCAGAGGAGAGTCTCACTGTAGAAAGTACTGACTTGAACGATGAAA
GAACAGGGGAGAGTCTCACTGTAGAAAGTACTGACTTGAACGATTCTGCAGTAAACATAGAAGCATTTGT
AGAGAGCCCCAAAATGGAATCTTGTGAGGGTGAAACTGCACAGGGACTGGACAGACACTGTGTTCCCAGC
TCAGACTCTGAGTTGCCTGAGCATATTCAAACAGAAAATACAGAAATAATTCCAGCATGTGAACATATTC
AAACAGAAAATACAGAAATAATTCCAGCGTGTGAGCATATTCAAACAGAAAATACAGAAATAATTCCAGT
GTGTGGTACTTTAGAAAATGAAAATTCTGATGCTGTTCAAGATTGTGAAGATAACTTATTAAAACATAAT
CTTGACAACTCCCAATCAGATAAATTCCTAGAAGAAACGACAGAGTCTCTGGTTGAACATCCCATCCATG
CAGAGTTACCTCACAAAGAGGTTGACCAGAGTGAGAAACATTTCAGTGAAGATAATAATGAATCAGTACC
TATGGAGTGCGATTCCTTCTGTAGTGACCAGAATGAGTCTGAAGTAGAGTCATCCGCAAATACTGACTCT
AAACAATTGAGTGAAAATTCTGTGCCACACAGTTCTGAGGACAAGCTGTCTTCTGATCCTGCAGTTGAGA
AGGTTGAAACTGTAGCACAACCAGCTGAAAGCTTAGTGGATAAAGCCCCAAAGCCTCGTACTCGAAGATC
TAGATTCCATTCTCCATCTACAACGTGGTCTCCTAATAAAGATGCTGCACAAGAAAAGAGGCGCGCTCAG
TCTCCATCTCCAAAAAGAGAGACTGTAGTAGAAAGTCAGAGTTCTCAGTCACCGTCACCCAAGAGAGAGT
CTGCCAGAGGACGGAGGAAATCGCGTTCTCTCTCACCGAAAAAAGATGTAGCAAGAGAAAGGAGGCAGTC
TCGCTCTCCAAAGAGAGAGAATGCTAGGGAAGCTAAAAGATCTGAGTCAGGGTCCCCAAGAAGAGATACT
TCTAGAGAGAACCAGAGGTCTCAGTCCCGAGTGAAAGATTCTTCCTCAAGAGAAAAGTCGAGGTCCCGGA
GCAGAGAGAGAGAAAGCGATAGAGAAGCTCAGAGGAGAGAGCGAGACAGAGAGAGGAGAGCTAGAAGATG
GTCCCGGTCCAGATCCCGCTCTCGATCGCCATCAAGATTAAGAACAAAAAGTAAGAGTTCATCGTTTGGT
AGAAATGAGAGAGATAATTACTCTCCTCGGTGGAAGGAAAGATGGACAAATGATGGTTGGAGGTGTCCCA
GAGGAAATGACCGGTACCGGAGGAATGATTCAGAGAAACAAAATGAAAATACAAGAAATGAAAAGAATGA
CATCACTGCAGATAGTAATGATCCAAGTTCCACAGATAAGCATAGAAGTGACTGTCCCAGTTGGGTAACA
GAGAAAATAAACTCTGGGCCAGATCCAAGGACCAGAAATCCAGAAAAGTTAAAAGATTCCCACTGGGAAG
AAAACAGAAATGAAAATTCAGGGAATTCTTGGACTAAAAACTTTGGCCCAGGCTGGATGTCCAGCCGTGG
TCGAGGCGGCCGTGGGAAAGGTGCTTACAGAGGTAATTTTGCCTGTAATGACCAGAGCGAGAACAGGTGG
CAAAGCCGTACACCCCTCTCAGGGAGCGACTCTTTCAAGTCTGCGGAGCAGCAGCCCTCTAAGCGCAAAA
GTGAGCAGGAGCTGTCCTTTGGCACAGCGGCAGACAGATCAGGGTGGACGTCTGCATCTAGCTGGGCAGT
AAGAAAGACTCTGCCCGCAGATGTGCAGAGCTATTACTCGCGGCGCGGCAGGAACTCTTCAGGCCCGCAG
TCTGGGTGGATGAGACAGGAGGAGGAGACACCTGAGCAGGATTCTAACTTAAAAGACCAAACAAACCAAG
TCGATGGTTCTCAGCTGCCTGTGAACATGATGCAGCCACACATGAGTGTGATGCAGCCTCCAGTGAACGC
CCCGCACCCGCCTGTGGGCGTCTTCCCATACCCAGTGGGGCTGCCCGCCCCGATGATGAATATGCAGCGG
AACCCTTTCACCATGCACCCTCCGATGCCCCTGCATCTCCACACAGGAGTTCCTCTCATGCAGGTAGCTG
CCCCTGCAAGTATACCTCAGGGACCGCCGCCACCACCCCCTCCGCCACCATCCCAGCAGGTCAGCTACGT
CGCCTCACAACCAGATGGGAAACAAGTGCAGGGCCTTTCAAGTGCTTCTCATGTAAGTAATAACATGAAT
ACACAAGTGTTGCCTGCTCCATCAGCAGCCCCAGCAAACACGGGATCAGTTCAGGGACCAAGTTCTGGTA
ATACTTCGTCATCAAGTCACGTCCAAGCCTCTAACGCTGCTGTAAAATTGGCAGAAAGCAAAAAATTGCA
AATTCAAGAGAAAGCAGCACAGGAGGTGAAACTGGCTATTAAGCCGTTTTATCAGAATAAAGACATCACT
AAGGAAGAGTACAAAGAGATCGTGCGGAAGGCAGTGGACAAAGTTTGTCATAGTAAGAGTGGAGAAGTAA
ACTCTACCAAAGTGGCCAATCTGGTTAAGGCGTACGTAGACAAGTACAGATACTCGCGGAAGAAAGCTCT
GGAAGAACCGGGGTCTACAGAAAAAACCTAG

Translation (1456 aa):
MKKKSVYNQNVGDQECDDMEGEENSNTADASGLLYSEADRCPICLSCLLGKEVGFPESCNHVFCMACILK
WAEILASCPIDRKPFQAVFELSAFEGCAKIQVKRRLRETEDKENQRSFKKQLFYHESSKGNKRKRNTIRE
DLLCERSDGLKVLYRNISNKMDGKKNATVKTNKVQRSNQCTDSCIRNEMSSVFSCGSHSWGPRTHRASCT
ESIEVNEISALIRQKRQELELSWFPNTLPGNGRVGSVPWSVETAFLSLASSGLPRTVFPASTTSLEHFGT
SHKGYALAHTQGGGEKKQTSGTSNTRGSRRKPAATAPTRRSTRNTRAETVSQSQKSPVSNYSECDAPGNS
NSSVSISPPAESEKQTRQAPKRKSVRRGRKPPLLKKKLRRSVPPAEKSSSDSVEEETVDSDTPPVLEKEQ
QSCVESSSICSVQTDEENHLHLESCSEQTEENEQANNHEIEEQTESLNSESCTQDPPGLVGEDTGIEAKE
FCADHDISPDTSLRGRDSAEHQEQLSGSSESEVQALVCTESPPEGSPTCPPSDIEHQPVSSPLGEVSDNT
TPVVSDERAEESLTVESTDLNDERTGESLTVESTDLNDSAVNIEAFVESPKMESCEGETAQGLDRHCVPS
SDSELPEHIQTENTEIIPACEHIQTENTEIIPACEHIQTENTEIIPVCGTLENENSDAVQDCEDNLLKHN
LDNSQSDKFLEETTESLVEHPIHAELPHKEVDQSEKHFSEDNNESVPMECDSFCSDQNESEVESSANTDS
KQLSENSVPHSSEDKLSSDPAVEKVETVAQPAESLVDKAPKPRTRRSRFHSPSTTWSPNKDAAQEKRRAQ
SPSPKRETVVESQSSQSPSPKRESARGRRKSRSLSPKKDVARERRQSRSPKRENAREAKRSESGSPRRDT
SRENQRSQSRVKDSSSREKSRSRSRERESDREAQRRERDRERRARRWSRSRSRSRSPSRLRTKSKSSSFG
RNERDNYSPRWKERWTNDGWRCPRGNDRYRRNDSEKQNENTRNEKNDITADSNDPSSTDKHRSDCPSWVT
EKINSGPDPRTRNPEKLKDSHWEENRNENSGNSWTKNFGPGWMSSRGRGGRGKGAYRGNFACNDQSENRW
QSRTPLSGSDSFKSAEQQPSKRKSEQELSFGTAADRSGWTSASSWAVRKTLPADVQSYYSRRGRNSSGPQ
SGWMRQEEETPEQDSNLKDQTNQVDGSQLPVNMMQPHMSVMQPPVNAPHPPVGVFPYPVGLPAPMMNMQR
NPFTMHPPMPLHLHTGVPLMQVAAPASIPQGPPPPPPPPPSQQVSYVASQPDGKQVQGLSSASHVSNNMN
TQVLPAPSAAPANTGSVQGPSSGNTSSSSHVQASNAAVKLAESKKLQIQEKAAQEVKLAIKPFYQNKDIT
KEEYKEIVRKAVDKVCHSKSGEVNSTKVANLVKAYVDKYRYSRKKALEEPGSTEKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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