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Report for CCDS34636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34636.1 Public Homo sapiens 7 SUN3 24 110 108 CCDS HistoryNCBI Gene:256979Re-query CCDS DB by CCDS ID:34636.1Re-query CCDS DB by GeneID:256979See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34636.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297325.9 ENSP00000297325.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297325.9Link to Ensembl Protein Viewer:ENSP00000297325.4Re-query CCDS DB by Nucleotide ID:ENST00000297325Re-query CCDS DB by Protein ID:ENSP00000297325
Original member Current member EBI ENST00000395572.6 ENSP00000378939.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395572.6Link to Ensembl Protein Viewer:ENSP00000378939.2Re-query CCDS DB by Nucleotide ID:ENST00000395572Re-query CCDS DB by Protein ID:ENSP00000378939
Original member Current member NCBI NM_001030019.2 NP_001025190.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001030019.2Link to Protein Sequence:NP_001025190.1Re-query CCDS DB by Nucleotide ID:NM_001030019Re-query CCDS DB by Protein ID:NP_001025190Link to BLAST:NP_001025190.1
Original member Current member NCBI NM_152782.4 NP_689995.3 Accepted alive Link to Nucleotide Sequence:NM_152782.4Link to Protein Sequence:NP_689995.3Re-query CCDS DB by Nucleotide ID:NM_152782Re-query CCDS DB by Protein ID:NP_689995Link to BLAST:NP_689995.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025190.1 357 Q8TAQ9-1 357 100% 0 0
NP_689995.3 357 Q8TAQ9-1 357 100% 0 0

Chromosomal Locations for CCDS 34636.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 47987330 47987449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47988788 47988880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47994315 47994482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47996031 47996146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 48005969 48006053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 48007165 48007327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 48009035 48009075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 48017262 48017365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 48025877 48025938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 48028817 48028938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1074 nt):
ATGAGTGGAAAAACAAAGGCAAGAAGGGCTGCCATGTTTTTTAGACGTTGCTCTGAAGACGCCAGCGGTA
GCGCCAGTGGCAATGCTTTGTTATCAGAGGACGAAAATCCTGATGCGAATGGGGTAACTCGATCATGGAA
GATTATTCTAAGTACAATGCTTACACTGACTTTTCTTCTTGTAGGACTCCTAAATCATCAGTGGCTTAAA
GAAACAGATGTTCCTCAGAAATCCAGACAATTATATGCCATAATTGCAGAATATGGTTCAAGGCTTTATA
AATATCAGGCCAGACTTCGTATGCCTAAAGAGCAACTGGAACTTTTAAAGAAGGAAAGCCAGAATCTGGA
AAACAATTTTCGTCAAATTCTATTTTTGATCGAACAAATAGATGTCCTGAAGGCATTGCTAAGAGATATG
AAGGATGGTATGGACAATAATCACAACTGGAACACCCATGGAGACCCTGTGGAGGACCCGGACCACACAG
AGGAAGTGTCAAACTTGGTCAATTATGTACTTAAAAAGTTGAGAGAAGACCAAGTCGAGATGGCTGATTA
TGCCCTGAAGTCGGCCGGAGCCTCCATCATTGAAGCTGGGACCTCAGAAAGTTATAAAAATAATAAAGCA
AAATTGTACTGGCATGGGATAGGTTTCCTAAATCATGAAATGCCTCCAGATATTATTCTTCAGCCGGATG
TCTACCCTGGAAAGTGCTGGGCTTTTCCAGGTTCCCAGGGTCATACCCTAATCAAGCTTGCTACAAAGAT
CATACCAACTGCTGTTACCATGGAGCACATCTCAGAGAAGGTGTCTCCGTCAGGAAACATCTCCAGTGCA
CCCAAGGAATTTTCTGTCTATGGCATCACAAAAAAATGTGAAGGAGAAGAAATTTTCCTAGGTCAGTTTA
TATATAACAAAACAGGAACCACCGTTCAAACATTTGAACTCCAGCATGCAGTTTCTGAATATTTATTATG
TGTGAAACTTAATATCTTTAGCAACTGGGGACACCCGAAGTATACTTGTTTATATCGATTCAGGGTCCAT
GGCACACCAGGCAAGCACATCTAG

Translation (357 aa):
MSGKTKARRAAMFFRRCSEDASGSASGNALLSEDENPDANGVTRSWKIILSTMLTLTFLLVGLLNHQWLK
ETDVPQKSRQLYAIIAEYGSRLYKYQARLRMPKEQLELLKKESQNLENNFRQILFLIEQIDVLKALLRDM
KDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKA
KLYWHGIGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSA
PKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVH
GTPGKHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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